5JB5A

A simplified bpti variant containing 22 alanines out of 58 residues
Total Genus 9
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
9
sequence length
57
structure length
57
Chain Sequence
RPAFCLEPPYAGPGAAAIIRYFYNAAAGAAQAFVYGGVAAKRNNFASAADALAACAA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase inhibitor
molecule keywords Pancreatic trypsin inhibitor
publication title Crystal structures of highly simplified BPTIs provide insights into hydration-driven increase of unfolding enthalpy
pubmed doi rcsb
source organism Bos taurus
total genus 9
structure length 57
sequence length 57
chains with identical sequence B, C
ec nomenclature
pdb deposition date 2016-04-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00014 Kunitz_BPTI Kunitz/Bovine pancreatic trypsin inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
4.10.410.10 Few Secondary Structures Irregular Factor Xa Inhibitor Pancreatic trypsin inhibitor Kunitz domain 5jb5A00
3BTGI 1TFXC 1G6XA 1IRHA 1T8LB 2J6DA 2KNTA 3UIRC 3BTFI 3BTHI 3WNYA 4U30W 2KAII 3LDIA 5JB6A 4ISLB 1AALA 1P2JI 4DG4C 1TOCR 3BTTI 1TAWB 3BTMI 4Y10I 2FI4I 2UUXA 4ISOB 2CA7A 3M7QB 4Y11I 1EJMB 3TGKI 4NTXB 3BTWI 2HEXA 1JV9A 1LD5A 3CI7A 3AUGA 3FP8I 3BTEI 1UUBA 1P2OB 2M99A 3OFWA 2ZVXA 5JB7A 2W8XA 2LFKA 1EAWB 3LDJA 1P2II 1CA0D 4Y0YI 1QLQA 2IJOI 3AUIA 2M01A 1Y62A 3T62D 1FANA 1YLDB 1AAPA 4NTWB 1FY8I 1BPIA 4BQDA 6PTIA 1PITA 1P2QB 2TGPI 1B0CA 1D0DB 4NTYB 1JV8A 3UOUB 1TCPA 2RA3C 4ISNB 1BHCA 2DDJA 2TPII 1ADZA 1FAKI 1YKTB 2KCRA 2ZJXA 1K6UA 2DDIA 8PTIA 1BPTA 1KNTA 5JB5A 3TGII 2FI3I 2FI5I 1CO7I 4BNRI 4TPII 1DTXA 1YC0I 5JB4A 1T8NB 1DEMA 1BRBI 3D65I 1BZXI 4WXVC 1ZR0B 2JOTA 3FP6I 3L3TE 1BRCI 3OTJI 1TAPA 2R9PE 3BTDI 3LDMA 3BTQI 1TPAI 3P92E 4U32X 4BD9B 2FTLI 1T8MB 4Y0ZI 1JC6A 2PTCI 3U1JE 3TGJI 3AUHA 7PTIA 3P95E 4WWYC 3AUDA 3BTKI 1P2NB 1BTHP 1DTKA 2FTMB 1KUNA 1BTIA 1T8OB 1ZJDB 1BUNB 1T7CB 1KTHA 1OA65 1BF0A 3AUEA 1NAGA 2ODYE 2LFLA 1MTND 5PTIA 4PTIA 1P2MB 1CBWD 9PTIA 1DENA 3L33E 4DTGK 3TPII 1D0DA 1BIKA 1F7ZI 1LD6A 3BYBA 3AUCA 1UUAA 1P2KI 1YLCB 3FP7J 5C67C 3AUBA 1KIGI 3GYMI 1F5RI 2UUYB 1OA55 1BZ5A 1SHPA
chains in the Genus database with same CATH superfamily
3BTGI 1TFXC 1G6XA 1IRHA 1T8LB 2J6DA 2KNTA 3UIRC 3BTFI 3BTHI 3WNYA 4U30W 2KAII 3LDIA 5JB6A 4ISLB 1AALA 1P2JI 4DG4C 1TOCR 3BTTI 1TAWB 3BTMI 4Y10I 2FI4I 2UUXA 4ISOB 2CA7A 3M7QB 4Y11I 1EJMB 3TGKI 4NTXB 3BTWI 2HEXA 1JV9A 1LD5A 3CI7A 3AUGA 3FP8I 3BTEI 1UUBA 1P2OB 2M99A 3OFWA 2ZVXA 5JB7A 2W8XA 2LFKA 1EAWB 3LDJA 1P2II 1CA0D 4Y0YI 1QLQA 2IJOI 3AUIA 2M01A 1Y62A 3T62D 1FANA 1YLDB 1AAPA 4NTWB 1FY8I 1BPIA 4BQDA 6PTIA 1PITA 1P2QB 2TGPI 1B0CA 1D0DB 4NTYB 1JV8A 3UOUB 1TCPA 2RA3C 4ISNB 1BHCA 2DDJA 2TPII 1ADZA 1FAKI 1YKTB 2KCRA 2ZJXA 1K6UA 2DDIA 8PTIA 1BPTA 1KNTA 5JB5A 3TGII 2FI3I 2FI5I 1CO7I 4BNRI 4TPII 1DTXA 1YC0I 5JB4A 1T8NB 1DEMA 1BRBI 3D65I 1BZXI 4WXVC 1ZR0B 2JOTA 3FP6I 3L3TE 1BRCI 3OTJI 1TAPA 2R9PE 3BTDI 3LDMA 3BTQI 1TPAI 3P92E 4U32X 4BD9B 2FTLI 1T8MB 4Y0ZI 1JC6A 2PTCI 3U1JE 3TGJI 3AUHA 7PTIA 3P95E 4WWYC 3AUDA 3BTKI 1P2NB 1BTHP 1DTKA 2FTMB 1KUNA 1BTIA 1T8OB 1ZJDB 1BUNB 1T7CB 1KTHA 1OA65 1BF0A 3AUEA 1NAGA 2ODYE 2LFLA 1MTND 5PTIA 4PTIA 1P2MB 1CBWD 9PTIA 1DENA 3L33E 4DTGK 3TPII 1D0DA 1BIKA 1F7ZI 1LD6A 3BYBA 3AUCA 1UUAA 1P2KI 1YLCB 3FP7J 5C67C 3AUBA 1KIGI 3GYMI 1F5RI 2UUYB 1OA55 1BZ5A 1SHPA
chains in the Genus database with same CATH topology
3BTGI 1TFXC 1G6XA 1IRHA 1T8LB 2J6DA 2KNTA 3UIRC 3BTFI 3BTHI 3WNYA 4U30W 2KAII 3LDIA 5JB6A 4ISLB 1AALA 1P2JI 4DG4C 1TOCR 3BTTI 1TAWB 3BTMI 4Y10I 2FI4I 2UUXA 4ISOB 2CA7A 3M7QB 4Y11I 1EJMB 3TGKI 4NTXB 3BTWI 2HEXA 1JV9A 1LD5A 3CI7A 3AUGA 3FP8I 3BTEI 1UUBA 1P2OB 2M99A 3OFWA 2ZVXA 5JB7A 2W8XA 2LFKA 1EAWB 3LDJA 1P2II 1CA0D 4Y0YI 1QLQA 2IJOI 3AUIA 2M01A 1Y62A 3T62D 1FANA 1YLDB 1AAPA 4NTWB 1FY8I 1BPIA 4BQDA 6PTIA 1PITA 1P2QB 2TGPI 1B0CA 1D0DB 4NTYB 1JV8A 3UOUB 1TCPA 2RA3C 4ISNB 1BHCA 2DDJA 2TPII 1ADZA 1FAKI 1YKTB 2KCRA 2ZJXA 1K6UA 2DDIA 8PTIA 1BPTA 1KNTA 5JB5A 3TGII 2FI3I 2FI5I 1CO7I 4BNRI 4TPII 1DTXA 1YC0I 5JB4A 1T8NB 1DEMA 1BRBI 3D65I 1BZXI 4WXVC 1ZR0B 2JOTA 3FP6I 3L3TE 1BRCI 3OTJI 1TAPA 2R9PE 3BTDI 3LDMA 3BTQI 1TPAI 3P92E 4U32X 4BD9B 2FTLI 1T8MB 4Y0ZI 1JC6A 2PTCI 3U1JE 3TGJI 3AUHA 7PTIA 3P95E 4WWYC 3AUDA 3BTKI 1P2NB 1BTHP 1DTKA 2FTMB 1KUNA 1BTIA 1T8OB 1ZJDB 1BUNB 1T7CB 1KTHA 1OA65 1BF0A 3AUEA 1NAGA 2ODYE 2LFLA 1MTND 5PTIA 4PTIA 1P2MB 1CBWD 9PTIA 1DENA 3L33E 4DTGK 3TPII 1D0DA 1BIKA 1F7ZI 1LD6A 3BYBA 3AUCA 1UUAA 1P2KI 1YLCB 3FP7J 5C67C 3AUBA 1KIGI 3GYMI 1F5RI 2UUYB 1OA55 1BZ5A 1SHPA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3BTG I;  1TFX C;  1G6X A;  1IRH A;  1T8L B;  2J6D A;  2KNT A;  3UIR C;  3BTF I;  3BTH I;  3WNY A;  4U30 W;  2KAI I;  3LDI A;  5JB6 A;  4ISL B;  1AAL A;  1P2J I;  4DG4 C;  1TOC R;  3BTT I;  1TAW B;  3BTM I;  4Y10 I;  2FI4 I;  2UUX A;  4ISO B;  2CA7 A;  3M7Q B;  4Y11 I;  1EJM B;  3TGK I;  4NTX B;  3BTW I;  2HEX A;  1JV9 A;  1LD5 A;  3CI7 A;  3AUG A;  3FP8 I;  3BTE I;  1UUB A;  1P2O B;  2M99 A;  3OFW A;  2ZVX A;  5JB7 A;  2W8X A;  2LFK A;  1EAW B;  3LDJ A;  1P2I I;  1CA0 D;  4Y0Y I;  1QLQ A;  2IJO I;  3AUI A;  2M01 A;  1Y62 A;  3T62 D;  1FAN A;  1YLD B;  1AAP A;  4NTW B;  1FY8 I;  1BPI A;  4BQD A;  6PTI A;  1PIT A;  1P2Q B;  2TGP I;  1B0C A;  1D0D B;  4NTY B;  1JV8 A;  3UOU B;  1TCP A;  2RA3 C;  4ISN B;  1BHC A;  2DDJ A;  2TPI I;  1ADZ A;  1FAK I;  1YKT B;  2KCR A;  2ZJX A;  1K6U A;  2DDI A;  8PTI A;  1BPT A;  1KNT A;  5JB5 A;  3TGI I;  2FI3 I;  2FI5 I;  1CO7 I;  4BNR I;  4TPI I;  1DTX A;  1YC0 I;  5JB4 A;  1T8N B;  1DEM A;  1BRB I;  3D65 I;  1BZX I;  4WXV C;  1ZR0 B;  2JOT A;  3FP6 I;  3L3T E;  1BRC I;  3OTJ I;  1TAP A;  2R9P E;  3BTD I;  3LDM A;  3BTQ I;  1TPA I;  3P92 E;  4U32 X;  4BD9 B;  2FTL I;  1T8M B;  4Y0Z I;  1JC6 A;  2PTC I;  3U1J E;  3TGJ I;  3AUH A;  7PTI A;  3P95 E;  4WWY C;  3AUD A;  3BTK I;  1P2N B;  1BTH P;  1DTK A;  2FTM B;  1KUN A;  1BTI A;  1T8O B;  1ZJD B;  1BUN B;  1T7C B;  1KTH A;  1OA6 5;  1BF0 A;  3AUE A;  1NAG A;  2ODY E;  2LFL A;  1MTN D;  5PTI A;  4PTI A;  1P2M B;  1CBW D;  9PTI A;  1DEN A;  3L33 E;  4DTG K;  3TPI I;  1D0D A;  1BIK A;  1F7Z I;  1LD6 A;  3BYB A;  3AUC A;  1UUA A;  1P2K I;  1YLC B;  3FP7 J;  5C67 C;  3AUB A;  1KIG I;  3GYM I;  1F5R I;  2UUY B;  1OA5 5;  1BZ5 A;  1SHP A; 
#chains in the Genus database with same CATH topology
 3BTG I;  1TFX C;  1G6X A;  1IRH A;  1T8L B;  2J6D A;  2KNT A;  3UIR C;  3BTF I;  3BTH I;  3WNY A;  4U30 W;  2KAI I;  3LDI A;  5JB6 A;  4ISL B;  1AAL A;  1P2J I;  4DG4 C;  1TOC R;  3BTT I;  1TAW B;  3BTM I;  4Y10 I;  2FI4 I;  2UUX A;  4ISO B;  2CA7 A;  3M7Q B;  4Y11 I;  1EJM B;  3TGK I;  4NTX B;  3BTW I;  2HEX A;  1JV9 A;  1LD5 A;  3CI7 A;  3AUG A;  3FP8 I;  3BTE I;  1UUB A;  1P2O B;  2M99 A;  3OFW A;  2ZVX A;  5JB7 A;  2W8X A;  2LFK A;  1EAW B;  3LDJ A;  1P2I I;  1CA0 D;  4Y0Y I;  1QLQ A;  2IJO I;  3AUI A;  2M01 A;  1Y62 A;  3T62 D;  1FAN A;  1YLD B;  1AAP A;  4NTW B;  1FY8 I;  1BPI A;  4BQD A;  6PTI A;  1PIT A;  1P2Q B;  2TGP I;  1B0C A;  1D0D B;  4NTY B;  1JV8 A;  3UOU B;  1TCP A;  2RA3 C;  4ISN B;  1BHC A;  2DDJ A;  2TPI I;  1ADZ A;  1FAK I;  1YKT B;  2KCR A;  2ZJX A;  1K6U A;  2DDI A;  8PTI A;  1BPT A;  1KNT A;  5JB5 A;  3TGI I;  2FI3 I;  2FI5 I;  1CO7 I;  4BNR I;  4TPI I;  1DTX A;  1YC0 I;  5JB4 A;  1T8N B;  1DEM A;  1BRB I;  3D65 I;  1BZX I;  4WXV C;  1ZR0 B;  2JOT A;  3FP6 I;  3L3T E;  1BRC I;  3OTJ I;  1TAP A;  2R9P E;  3BTD I;  3LDM A;  3BTQ I;  1TPA I;  3P92 E;  4U32 X;  4BD9 B;  2FTL I;  1T8M B;  4Y0Z I;  1JC6 A;  2PTC I;  3U1J E;  3TGJ I;  3AUH A;  7PTI A;  3P95 E;  4WWY C;  3AUD A;  3BTK I;  1P2N B;  1BTH P;  1DTK A;  2FTM B;  1KUN A;  1BTI A;  1T8O B;  1ZJD B;  1BUN B;  1T7C B;  1KTH A;  1OA6 5;  1BF0 A;  3AUE A;  1NAG A;  2ODY E;  2LFL A;  1MTN D;  5PTI A;  4PTI A;  1P2M B;  1CBW D;  9PTI A;  1DEN A;  3L33 E;  4DTG K;  3TPI I;  1D0D A;  1BIK A;  1F7Z I;  1LD6 A;  3BYB A;  3AUC A;  1UUA A;  1P2K I;  1YLC B;  3FP7 J;  5C67 C;  3AUB A;  1KIG I;  3GYM I;  1F5R I;  2UUY B;  1OA5 5;  1BZ5 A;  1SHP A; 
#chains in the Genus database with same CATH homology
 3BTG I;  1TFX C;  1G6X A;  1IRH A;  1T8L B;  2J6D A;  2KNT A;  3UIR C;  3BTF I;  3BTH I;  3WNY A;  4U30 W;  2KAI I;  3LDI A;  5JB6 A;  4ISL B;  1AAL A;  1P2J I;  4DG4 C;  1TOC R;  3BTT I;  1TAW B;  3BTM I;  4Y10 I;  2FI4 I;  2UUX A;  4ISO B;  2CA7 A;  3M7Q B;  4Y11 I;  1EJM B;  3TGK I;  4NTX B;  3BTW I;  2HEX A;  1JV9 A;  1LD5 A;  3CI7 A;  3AUG A;  3FP8 I;  3BTE I;  1UUB A;  1P2O B;  2M99 A;  3OFW A;  2ZVX A;  5JB7 A;  2W8X A;  2LFK A;  1EAW B;  3LDJ A;  1P2I I;  1CA0 D;  4Y0Y I;  1QLQ A;  2IJO I;  3AUI A;  2M01 A;  1Y62 A;  3T62 D;  1FAN A;  1YLD B;  1AAP A;  4NTW B;  1FY8 I;  1BPI A;  4BQD A;  6PTI A;  1PIT A;  1P2Q B;  2TGP I;  1B0C A;  1D0D B;  4NTY B;  1JV8 A;  3UOU B;  1TCP A;  2RA3 C;  4ISN B;  1BHC A;  2DDJ A;  2TPI I;  1ADZ A;  1FAK I;  1YKT B;  2KCR A;  2ZJX A;  1K6U A;  2DDI A;  8PTI A;  1BPT A;  1KNT A;  5JB5 A;  3TGI I;  2FI3 I;  2FI5 I;  1CO7 I;  4BNR I;  4TPI I;  1DTX A;  1YC0 I;  5JB4 A;  1T8N B;  1DEM A;  1BRB I;  3D65 I;  1BZX I;  4WXV C;  1ZR0 B;  2JOT A;  3FP6 I;  3L3T E;  1BRC I;  3OTJ I;  1TAP A;  2R9P E;  3BTD I;  3LDM A;  3BTQ I;  1TPA I;  3P92 E;  4U32 X;  4BD9 B;  2FTL I;  1T8M B;  4Y0Z I;  1JC6 A;  2PTC I;  3U1J E;  3TGJ I;  3AUH A;  7PTI A;  3P95 E;  4WWY C;  3AUD A;  3BTK I;  1P2N B;  1BTH P;  1DTK A;  2FTM B;  1KUN A;  1BTI A;  1T8O B;  1ZJD B;  1BUN B;  1T7C B;  1KTH A;  1OA6 5;  1BF0 A;  3AUE A;  1NAG A;  2ODY E;  2LFL A;  1MTN D;  5PTI A;  4PTI A;  1P2M B;  1CBW D;  9PTI A;  1DEN A;  3L33 E;  4DTG K;  3TPI I;  1D0D A;  1BIK A;  1F7Z I;  1LD6 A;  3BYB A;  3AUC A;  1UUA A;  1P2K I;  1YLC B;  3FP7 J;  5C67 C;  3AUB A;  1KIG I;  3GYM I;  1F5R I;  2UUY B;  1OA5 5;  1BZ5 A;  1SHP A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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