5JHNA

Structure of g9a set-domain with histone h3k9ala mutant peptide and bound s-adenosylmethionine
Total Genus 78
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
78
sequence length
273
structure length
273
Chain Sequence
IRTEKIICRDVARGYENVPIPCVNGVDGEPCPEDYKYISENCETSTMNIDRNITHLQHCTCVDDCSSSNCLCGQLSIRCWYDKDGRLLQEFNKIEPPLIFECNQACSCWRNCKNRVVQSGIKVRLQLYRTAKMGWGVRALQTIPQGTFICEYVGELISDAEADVREDDSYLFDLDNKDGEVYCIDARYYGNISRFINHLCDPNIIPVRVFMLHQDLRFPRIAFFSSRDIRTGEELGFDYGDRFWDIKSKYFTCQCGSEKCKHSAEAIALEQSR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transferase
molecule keywords Histone-lysine N-methyltransferase EHMT2
publication title S-adenosyl methionine is necessary for inhibition of the methyltransferase G9a by the lysine 9 to methionine mutation on histone H3.
pubmed doi rcsb
source organism Homo sapiens
total genus 78
structure length 273
sequence length 273
chains with identical sequence B
ec nomenclature ec 2.1.1.43: Histone-lysine N-methyltransferase.
pdb deposition date 2016-04-21

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00856 SET SET domain
A PF05033 Pre-SET Pre-SET motif
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.270.10 Mainly Beta Beta Complex Beta-clip-like SET domain 5jhnA00
5TEGA 5T5GA 4JDSA 3K5KA 4BUPA 3OXFA 3VUZA 5ARFA 4YPAA 3F9WA 1N6CA 4E47A 2F69A 3KMTA 3VV0A 2O8JA 5EG2A 1O9SA 4J7FA 3KMJA 5CCLA 3M55A 5CPRB 5KJNA 4QENA 3N71A 3S7DA 4YPUA 1N6AA 3MO5A 3MO0A 3TG4A 1PEGA 5ARGA 3SWCA 3RQ4A 5JINA 3KMAA 4FMUA 3PDNA 3OXLA 4O30A 4YPEA 3RAYA 1N3JA 3CBMA 5CCMA 4IJ8A 3RU0A 3CBPA 4LDGA 1XQHA 4WUYA 5F6LA 3S7FA 3MO2A 3S7BA 5HI7A 5EX0A 4I51A 5LSZA 3TG5A 4YNDA 5HQ8A 2W5YA 3S7JA 3OS5A 4RZ0A 5F59A 4J7IA 5JJ0A 5LSXA 4NVQA 4O6FA 3HNAA 1ZKKA 1MVHA 1H3IA 2W5ZA 3QWVA 4MI0A 2IGQA 3RJWA 1MVXA 3DB5A 5T0KA 3SW9A 5KJLA 4QEOA 3M59A 3OXGA 3QWPA 1MT6A 3F9YA 5KJMA 5JHNA 4JLGA 4YNMA 2G46A 1MUFA 5JIYA 5EX3A 2QPWA 3M53A 3M58A 4QEPA 3M5AA 2JV0A 1ML9A 4IJDA 5F5EA 5TTFA 4MI5A 3S8PA 3M54A 3QWWA 3EP0A 3F9XA 4AU7A 5TH7A 4YNPA 3OPEA 3M57A 2BQZA 3M56A 3RIBA 3DALA 3OOIA 4H12A 4J83A 4NJ5A 3CBOA 3BO5A 3IHXA 2RFIA 3FPDA 2R3AA 4J8OA 3F9ZA 5T0MA 3MEKA 5KJKA 4C1QA 5AYFA 5F6KC 4Z4PA
chains in the Genus database with same CATH superfamily
5TEGA 5T5GA 4JDSA 3K5KA 4BUPA 3OXFA 3VUZA 5ARFA 4YPAA 3F9WA 1N6CA 4E47A 2F69A 3KMTA 3VV0A 2O8JA 5EG2A 1O9SA 4J7FA 3KMJA 5CCLA 3M55A 5CPRB 5KJNA 4QENA 3N71A 3S7DA 4YPUA 1N6AA 3MO5A 3MO0A 3TG4A 1PEGA 5ARGA 3SWCA 3RQ4A 5JINA 3KMAA 4FMUA 3PDNA 3OXLA 4O30A 4YPEA 3RAYA 1N3JA 3CBMA 5CCMA 4IJ8A 3RU0A 3CBPA 4LDGA 1XQHA 4WUYA 5F6LA 3S7FA 3MO2A 3S7BA 5HI7A 5EX0A 4I51A 5LSZA 3TG5A 4YNDA 5HQ8A 2W5YA 3S7JA 3OS5A 4RZ0A 5F59A 4J7IA 5JJ0A 5LSXA 4NVQA 4O6FA 3HNAA 1ZKKA 1MVHA 1H3IA 2W5ZA 3QWVA 4MI0A 2IGQA 3RJWA 1MVXA 3DB5A 5T0KA 3SW9A 5KJLA 4QEOA 3M59A 3OXGA 3QWPA 1MT6A 3F9YA 5KJMA 5JHNA 4JLGA 4YNMA 2G46A 1MUFA 5JIYA 5EX3A 2QPWA 3M53A 3M58A 4QEPA 3M5AA 2JV0A 1ML9A 4IJDA 5F5EA 5TTFA 4MI5A 3S8PA 3M54A 3QWWA 3EP0A 3F9XA 4AU7A 5TH7A 4YNPA 3OPEA 3M57A 2BQZA 3M56A 3RIBA 3DALA 3OOIA 4H12A 4J83A 4NJ5A 3CBOA 3BO5A 3IHXA 2RFIA 3FPDA 2R3AA 4J8OA 3F9ZA 5T0MA 3MEKA 5KJKA 4C1QA 5AYFA 5F6KC 4Z4PA
chains in the Genus database with same CATH topology
5TEGA 5T5GA 4JDSA 3K5KA 4BUPA 3OXFA 3VUZA 5ARFA 4YPAA 3F9WA 1N6CA 4E47A 2F69A 3KMTA 3VV0A 2O8JA 5EG2A 1O9SA 4J7FA 3KMJA 5CCLA 3M55A 5CPRB 5KJNA 4QENA 3N71A 3S7DA 4YPUA 1N6AA 3MO5A 3MO0A 3TG4A 1PEGA 5ARGA 3SWCA 3RQ4A 5JINA 3KMAA 4FMUA 3PDNA 3OXLA 4O30A 4YPEA 3RAYA 1N3JA 3CBMA 5CCMA 4IJ8A 3RU0A 3CBPA 4LDGA 1XQHA 4WUYA 5F6LA 3S7FA 3MO2A 3S7BA 5HI7A 5EX0A 4I51A 5LSZA 3TG5A 4YNDA 5HQ8A 2W5YA 3S7JA 3OS5A 4RZ0A 5F59A 4J7IA 5JJ0A 5LSXA 4NVQA 4O6FA 3HNAA 1ZKKA 1MVHA 1H3IA 2W5ZA 3QWVA 4MI0A 2IGQA 3RJWA 1MVXA 3DB5A 5T0KA 3SW9A 5KJLA 4QEOA 3M59A 3OXGA 3QWPA 1MT6A 3F9YA 5KJMA 5JHNA 4JLGA 4YNMA 2G46A 1MUFA 5JIYA 5EX3A 2QPWA 3M53A 3M58A 4QEPA 3M5AA 2JV0A 1ML9A 4IJDA 5F5EA 5TTFA 4MI5A 3S8PA 3M54A 3QWWA 3EP0A 3F9XA 4AU7A 5TH7A 4YNPA 3OPEA 3M57A 2BQZA 3M56A 3RIBA 3DALA 3OOIA 4H12A 4J83A 4NJ5A 3CBOA 3BO5A 3IHXA 2RFIA 3FPDA 2R3AA 4J8OA 3F9ZA 5T0MA 3MEKA 5KJKA 4C1QA 5AYFA 5F6KC 4Z4PA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5TEG A;  5T5G A;  4JDS A;  3K5K A;  4BUP A;  3OXF A;  3VUZ A;  5ARF A;  4YPA A;  3F9W A;  1N6C A;  4E47 A;  2F69 A;  3KMT A;  3VV0 A;  2O8J A;  5EG2 A;  1O9S A;  4J7F A;  3KMJ A;  5CCL A;  3M55 A;  5CPR B;  5KJN A;  4QEN A;  3N71 A;  3S7D A;  4YPU A;  1N6A A;  3MO5 A;  3MO0 A;  3TG4 A;  1PEG A;  5ARG A;  3SWC A;  3RQ4 A;  5JIN A;  3KMA A;  4FMU A;  3PDN A;  3OXL A;  4O30 A;  4YPE A;  3RAY A;  1N3J A;  3CBM A;  5CCM A;  4IJ8 A;  3RU0 A;  3CBP A;  4LDG A;  1XQH A;  4WUY A;  5F6L A;  3S7F A;  3MO2 A;  3S7B A;  5HI7 A;  5EX0 A;  4I51 A;  5LSZ A;  3TG5 A;  4YND A;  5HQ8 A;  2W5Y A;  3S7J A;  3OS5 A;  4RZ0 A;  5F59 A;  4J7I A;  5JJ0 A;  5LSX A;  4NVQ A;  4O6F A;  3HNA A;  1ZKK A;  1MVH A;  1H3I A;  2W5Z A;  3QWV A;  4MI0 A;  2IGQ A;  3RJW A;  1MVX A;  3DB5 A;  5T0K A;  3SW9 A;  5KJL A;  4QEO A;  3M59 A;  3OXG A;  3QWP A;  1MT6 A;  3F9Y A;  5KJM A;  5JHN A;  4JLG A;  4YNM A;  2G46 A;  1MUF A;  5JIY A;  5EX3 A;  2QPW A;  3M53 A;  3M58 A;  4QEP A;  3M5A A;  2JV0 A;  1ML9 A;  4IJD A;  5F5E A;  5TTF A;  4MI5 A;  3S8P A;  3M54 A;  3QWW A;  3EP0 A;  3F9X A;  4AU7 A;  5TH7 A;  4YNP A;  3OPE A;  3M57 A;  2BQZ A;  3M56 A;  3RIB A;  3DAL A;  3OOI A;  4H12 A;  4J83 A;  4NJ5 A;  3CBO A;  3BO5 A;  3IHX A;  2RFI A;  3FPD A;  2R3A A;  4J8O A;  3F9Z A;  5T0M A;  3MEK A;  5KJK A;  4C1Q A;  5AYF A;  5F6K C;  4Z4P A; 
#chains in the Genus database with same CATH topology
 5TEG A;  5T5G A;  4JDS A;  3K5K A;  4BUP A;  3OXF A;  3VUZ A;  5ARF A;  4YPA A;  3F9W A;  1N6C A;  4E47 A;  2F69 A;  3KMT A;  3VV0 A;  2O8J A;  5EG2 A;  1O9S A;  4J7F A;  3KMJ A;  5CCL A;  3M55 A;  5CPR B;  5KJN A;  4QEN A;  3N71 A;  3S7D A;  4YPU A;  1N6A A;  3MO5 A;  3MO0 A;  3TG4 A;  1PEG A;  5ARG A;  3SWC A;  3RQ4 A;  5JIN A;  3KMA A;  4FMU A;  3PDN A;  3OXL A;  4O30 A;  4YPE A;  3RAY A;  1N3J A;  3CBM A;  5CCM A;  4IJ8 A;  3RU0 A;  3CBP A;  4LDG A;  1XQH A;  4WUY A;  5F6L A;  3S7F A;  3MO2 A;  3S7B A;  5HI7 A;  5EX0 A;  4I51 A;  5LSZ A;  3TG5 A;  4YND A;  5HQ8 A;  2W5Y A;  3S7J A;  3OS5 A;  4RZ0 A;  5F59 A;  4J7I A;  5JJ0 A;  5LSX A;  4NVQ A;  4O6F A;  3HNA A;  1ZKK A;  1MVH A;  1H3I A;  2W5Z A;  3QWV A;  4MI0 A;  2IGQ A;  3RJW A;  1MVX A;  3DB5 A;  5T0K A;  3SW9 A;  5KJL A;  4QEO A;  3M59 A;  3OXG A;  3QWP A;  1MT6 A;  3F9Y A;  5KJM A;  5JHN A;  4JLG A;  4YNM A;  2G46 A;  1MUF A;  5JIY A;  5EX3 A;  2QPW A;  3M53 A;  3M58 A;  4QEP A;  3M5A A;  2JV0 A;  1ML9 A;  4IJD A;  5F5E A;  5TTF A;  4MI5 A;  3S8P A;  3M54 A;  3QWW A;  3EP0 A;  3F9X A;  4AU7 A;  5TH7 A;  4YNP A;  3OPE A;  3M57 A;  2BQZ A;  3M56 A;  3RIB A;  3DAL A;  3OOI A;  4H12 A;  4J83 A;  4NJ5 A;  3CBO A;  3BO5 A;  3IHX A;  2RFI A;  3FPD A;  2R3A A;  4J8O A;  3F9Z A;  5T0M A;  3MEK A;  5KJK A;  4C1Q A;  5AYF A;  5F6K C;  4Z4P A; 
#chains in the Genus database with same CATH homology
 5TEG A;  5T5G A;  4JDS A;  3K5K A;  4BUP A;  3OXF A;  3VUZ A;  5ARF A;  4YPA A;  3F9W A;  1N6C A;  4E47 A;  2F69 A;  3KMT A;  3VV0 A;  2O8J A;  5EG2 A;  1O9S A;  4J7F A;  3KMJ A;  5CCL A;  3M55 A;  5CPR B;  5KJN A;  4QEN A;  3N71 A;  3S7D A;  4YPU A;  1N6A A;  3MO5 A;  3MO0 A;  3TG4 A;  1PEG A;  5ARG A;  3SWC A;  3RQ4 A;  5JIN A;  3KMA A;  4FMU A;  3PDN A;  3OXL A;  4O30 A;  4YPE A;  3RAY A;  1N3J A;  3CBM A;  5CCM A;  4IJ8 A;  3RU0 A;  3CBP A;  4LDG A;  1XQH A;  4WUY A;  5F6L A;  3S7F A;  3MO2 A;  3S7B A;  5HI7 A;  5EX0 A;  4I51 A;  5LSZ A;  3TG5 A;  4YND A;  5HQ8 A;  2W5Y A;  3S7J A;  3OS5 A;  4RZ0 A;  5F59 A;  4J7I A;  5JJ0 A;  5LSX A;  4NVQ A;  4O6F A;  3HNA A;  1ZKK A;  1MVH A;  1H3I A;  2W5Z A;  3QWV A;  4MI0 A;  2IGQ A;  3RJW A;  1MVX A;  3DB5 A;  5T0K A;  3SW9 A;  5KJL A;  4QEO A;  3M59 A;  3OXG A;  3QWP A;  1MT6 A;  3F9Y A;  5KJM A;  5JHN A;  4JLG A;  4YNM A;  2G46 A;  1MUF A;  5JIY A;  5EX3 A;  2QPW A;  3M53 A;  3M58 A;  4QEP A;  3M5A A;  2JV0 A;  1ML9 A;  4IJD A;  5F5E A;  5TTF A;  4MI5 A;  3S8P A;  3M54 A;  3QWW A;  3EP0 A;  3F9X A;  4AU7 A;  5TH7 A;  4YNP A;  3OPE A;  3M57 A;  2BQZ A;  3M56 A;  3RIB A;  3DAL A;  3OOI A;  4H12 A;  4J83 A;  4NJ5 A;  3CBO A;  3BO5 A;  3IHX A;  2RFI A;  3FPD A;  2R3A A;  4J8O A;  3F9Z A;  5T0M A;  3MEK A;  5KJK A;  4C1Q A;  5AYF A;  5F6K C;  4Z4P A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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