5K22B

Crystal structure of the complex between human prl-2 phosphatase in reduced state and bateman domain of human cnnm3
Total Genus 36
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
36
sequence length
149
structure length
149
Chain Sequence
GPLNMIQGVLELRCRTVEDVLTPLEDCFMLDASTVLDFGVLASIMQSGHTRIPVYEEERSNIVDMLYLKDLAFVDPEDCTPLSTITRFYNHPLHFVFNDTKLDAVLEEFKRGKSHLAIVQKVNNEGEGDPFYEVLGLVTLEDVIEEIIR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transport protein/protein binding
molecule keywords Protein tyrosine phosphatase type IVA 2
publication title Phosphocysteine in the PRL-CNNM pathway mediates magnesium homeostasis.
pubmed doi rcsb
source organism Homo sapiens
total genus 36
structure length 149
sequence length 149
ec nomenclature
pdb deposition date 2016-05-18

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF00571 CBS CBS domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.10.580.10 Alpha Beta Roll CBS-domain CBS-domain 5k22B00
4GQWA 5K25C 2YVZA 4NOCA 5KS7A 3K6EA 4ESYB 3TE5C 4FXSA 2RIHA 4L28A 2NYCA 2OUXA 3OCOA 2QREE 2NYEA 1PBJA 3FNAA 4HG0A 4L3VA 2QH1A 2QRCE 2YZQA 2O16A 4L27A 4P1OA 4UUUA 3I8NA 4O9KA 4IY2A 4IY0A 2PFIA 3HF7A 3L31A 2QLVC 5IIPA 4L0DA 3KPCA 2EF7A 3PC4A 2OOYE 3LQNA 3LV9A 3OCMA 3KPBA 5MMZA 2QRDE 2RIFA 3PC3A 5K22B 2YVYA 3L2BA 4ESYA 2QR1E 4COOA 3OI8A 3SL7A 3FHMA 1XKFA 3PC2A 4IYSA 3KPDA 2P9MA 2EMQA 4DQWA 4GQVA 3FWSA 3K2VA 5K23C 5K24C 4P1GA 3FV6A 3DDJA 3ORGA 4FRYA 1YAVA 4IY3A 2ZY9A 3GBYA 3LFZA 1O50A 2YZIA 3KXRA 1PVMA 4GQYA 3FWRA 4PCUA 2UV6A 2RC3A 3T4NC 3KH5A 2YVXA 2D4ZA 2UV4A 4IY4A 2OOXE 2UV7A 1Y5HA 5LXQA 3LHHA 3TDHC 2UV5A
chains in the Genus database with same CATH superfamily
4GQWA 5K25C 2YVZA 4NOCA 5KS7A 3K6EA 4ESYB 3TE5C 4FXSA 2RIHA 2J9LA 4L28A 2NYCA 2OUXA 3OCOA 2QREE 2NYEA 1PBJA 3FNAA 4HG0A 4L3VA 2QH1A 2QRCE 2YZQA 2O16A 4L27A 4P1OA 4UUUA 3I8NA 4O9KA 4IY2A 4IY0A 2PFIA 3HF7A 3L31A 2QLVC 5IIPA 4L0DA 3KPCA 2EF7A 3PC4A 2OOYE 3LQNA 3LV9A 3OCMA 3KPBA 5MMZA 2QRDE 2RIFA 3PC3A 5K22B 2YVYA 3L2BA 4ESYA 2QR1E 4COOA 3OI8A 3SL7A 3FHMA 1XKFA 3PC2A 4IYSA 3KPDA 2P9MA 2EMQA 4DQWA 4GQVA 3FWSA 3K2VA 5K23C 5K24C 4P1GA 3FV6A 3DDJA 3ORGA 4FRYA 1YAVA 2JA3A 4IY3A 2ZY9A 3GBYA 3LFZA 1O50A 2YZIA 3KXRA 1PVMA 4GQYA 3FWRA 4PCUA 2UV6A 2RC3A 3T4NC 3KH5A 2YVXA 2D4ZA 2UV4A 4IY4A 2OOXE 2UV7A 1Y5HA 5LXQA 3LHHA 3TDHC 2UV5A
chains in the Genus database with same CATH topology
4GQWA 5K25C 2YVZA 4NOCA 5KS7A 3K6EA 4ESYB 3TE5C 4FXSA 2RIHA 2J9LA 4L28A 2NYCA 2OUXA 3OCOA 2QREE 2NYEA 1PBJA 3FNAA 4HG0A 4L3VA 2QH1A 2QRCE 2YZQA 2O16A 4L27A 4P1OA 4UUUA 3I8NA 4O9KA 4IY2A 4IY0A 2PFIA 3HF7A 3L31A 2QLVC 5IIPA 4L0DA 3KPCA 2EF7A 3PC4A 2OOYE 3LQNA 3LV9A 3OCMA 3KPBA 5MMZA 2QRDE 2RIFA 3PC3A 5K22B 2YVYA 3L2BA 4ESYA 2QR1E 4COOA 3OI8A 3SL7A 3FHMA 1XKFA 3PC2A 4IYSA 3KPDA 2P9MA 2EMQA 4DQWA 4GQVA 3FWSA 3K2VA 5K23C 5K24C 4P1GA 3FV6A 3DDJA 3ORGA 4FRYA 1YAVA 2JA3A 4IY3A 2ZY9A 3GBYA 3LFZA 1O50A 2YZIA 3KXRA 1PVMA 4GQYA 3FWRA 4PCUA 2UV6A 2RC3A 3T4NC 3KH5A 2YVXA 2D4ZA 2UV4A 4IY4A 2OOXE 2UV7A 1Y5HA 5LXQA 3LHHA 3TDHC 2UV5A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4GQW A;  5K25 C;  2YVZ A;  4NOC A;  5KS7 A;  3K6E A;  4ESY B;  3TE5 C;  4FXS A;  2RIH A;  4L28 A;  2NYC A;  2OUX A;  3OCO A;  2QRE E;  2NYE A;  1PBJ A;  3FNA A;  4HG0 A;  4L3V A;  2QH1 A;  2QRC E;  2YZQ A;  2O16 A;  4L27 A;  4P1O A;  4UUU A;  3I8N A;  4O9K A;  4IY2 A;  4IY0 A;  2PFI A;  3HF7 A;  3L31 A;  2QLV C;  5IIP A;  4L0D A;  3KPC A;  2EF7 A;  3PC4 A;  2OOY E;  3LQN A;  3LV9 A;  3OCM A;  3KPB A;  5MMZ A;  2QRD E;  2RIF A;  3PC3 A;  5K22 B;  2YVY A;  3L2B A;  4ESY A;  2QR1 E;  4COO A;  3OI8 A;  3SL7 A;  3FHM A;  1XKF A;  3PC2 A;  4IYS A;  3KPD A;  2P9M A;  2EMQ A;  4DQW A;  4GQV A;  3FWS A;  3K2V A;  5K23 C;  5K24 C;  4P1G A;  3FV6 A;  3DDJ A;  3ORG A;  4FRY A;  1YAV A;  4IY3 A;  2ZY9 A;  3GBY A;  3LFZ A;  1O50 A;  2YZI A;  3KXR A;  1PVM A;  4GQY A;  3FWR A;  4PCU A;  2UV6 A;  2RC3 A;  3T4N C;  3KH5 A;  2YVX A;  2D4Z A;  2UV4 A;  4IY4 A;  2OOX E;  2UV7 A;  1Y5H A;  5LXQ A;  3LHH A;  3TDH C;  2UV5 A; 
#chains in the Genus database with same CATH topology
 4GQW A;  5K25 C;  2YVZ A;  4NOC A;  5KS7 A;  3K6E A;  4ESY B;  3TE5 C;  4FXS A;  2RIH A;  2J9L A;  4L28 A;  2NYC A;  2OUX A;  3OCO A;  2QRE E;  2NYE A;  1PBJ A;  3FNA A;  4HG0 A;  4L3V A;  2QH1 A;  2QRC E;  2YZQ A;  2O16 A;  4L27 A;  4P1O A;  4UUU A;  3I8N A;  4O9K A;  4IY2 A;  4IY0 A;  2PFI A;  3HF7 A;  3L31 A;  2QLV C;  5IIP A;  4L0D A;  3KPC A;  2EF7 A;  3PC4 A;  2OOY E;  3LQN A;  3LV9 A;  3OCM A;  3KPB A;  5MMZ A;  2QRD E;  2RIF A;  3PC3 A;  5K22 B;  2YVY A;  3L2B A;  4ESY A;  2QR1 E;  4COO A;  3OI8 A;  3SL7 A;  3FHM A;  1XKF A;  3PC2 A;  4IYS A;  3KPD A;  2P9M A;  2EMQ A;  4DQW A;  4GQV A;  3FWS A;  3K2V A;  5K23 C;  5K24 C;  4P1G A;  3FV6 A;  3DDJ A;  3ORG A;  4FRY A;  1YAV A;  2JA3 A;  4IY3 A;  2ZY9 A;  3GBY A;  3LFZ A;  1O50 A;  2YZI A;  3KXR A;  1PVM A;  4GQY A;  3FWR A;  4PCU A;  2UV6 A;  2RC3 A;  3T4N C;  3KH5 A;  2YVX A;  2D4Z A;  2UV4 A;  4IY4 A;  2OOX E;  2UV7 A;  1Y5H A;  5LXQ A;  3LHH A;  3TDH C;  2UV5 A; 
#chains in the Genus database with same CATH homology
 4GQW A;  5K25 C;  2YVZ A;  4NOC A;  5KS7 A;  3K6E A;  4ESY B;  3TE5 C;  4FXS A;  2RIH A;  2J9L A;  4L28 A;  2NYC A;  2OUX A;  3OCO A;  2QRE E;  2NYE A;  1PBJ A;  3FNA A;  4HG0 A;  4L3V A;  2QH1 A;  2QRC E;  2YZQ A;  2O16 A;  4L27 A;  4P1O A;  4UUU A;  3I8N A;  4O9K A;  4IY2 A;  4IY0 A;  2PFI A;  3HF7 A;  3L31 A;  2QLV C;  5IIP A;  4L0D A;  3KPC A;  2EF7 A;  3PC4 A;  2OOY E;  3LQN A;  3LV9 A;  3OCM A;  3KPB A;  5MMZ A;  2QRD E;  2RIF A;  3PC3 A;  5K22 B;  2YVY A;  3L2B A;  4ESY A;  2QR1 E;  4COO A;  3OI8 A;  3SL7 A;  3FHM A;  1XKF A;  3PC2 A;  4IYS A;  3KPD A;  2P9M A;  2EMQ A;  4DQW A;  4GQV A;  3FWS A;  3K2V A;  5K23 C;  5K24 C;  4P1G A;  3FV6 A;  3DDJ A;  3ORG A;  4FRY A;  1YAV A;  2JA3 A;  4IY3 A;  2ZY9 A;  3GBY A;  3LFZ A;  1O50 A;  2YZI A;  3KXR A;  1PVM A;  4GQY A;  3FWR A;  4PCU A;  2UV6 A;  2RC3 A;  3T4N C;  3KH5 A;  2YVX A;  2D4Z A;  2UV4 A;  4IY4 A;  2OOX E;  2UV7 A;  1Y5H A;  5LXQ A;  3LHH A;  3TDH C;  2UV5 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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