5A68A

Crystal structure of the atttm3 product complex with two orthophosphates and manganese ions (form b)
Total Genus 65
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
65
sequence length
209
structure length
203
Chain Sequence
GAMEVEVKLRLLTAAAHLRLTTLLTPYHLKTLHQRNTFFDTPKNDLSLRRAVLRLRFLQNAPSPPRCIVSLKAKPTLANGISRVEEDEEEIEYWIGKECVESPAKLSDIGSRVLKRVKEEYGFNDFLGFVCLGGFENVRNVYEWRGVKLEVDETKYDFGNCYEIECETEEPERVKTMIEEFLTEEKIEFSNSDMTKFAVFRSG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords TRIPHOSPHATE TUNEL METALLOENZYME 3
publication title Structural Determinants for Substrate Binding and Catalysis in Triphosphate Tunnel Metalloenzymes.
pubmed doi rcsb
source organism Arabidopsis thaliana
total genus 65
structure length 203
sequence length 209
ec nomenclature ec 3.6.1.25: Triphosphatase.
pdb deposition date 2015-06-24

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01928 CYTH CYTH domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.320.10 Mainly Beta Beta Barrel Hypothetical Protein Pfu-838710-001 Hypothetical Protein Pfu-838710-001 5a68A00
4H63R 3TJ7A 5A67A 1YEMA 2FJTA 3V85A 5A66A 2ACAA 3N0YA 3C0TA 3BHDA 5A65A 5A64A 3TVLA 3TYPA 2DC4A 5A68A 2FBLA 2GFGA 5A5YA 2HZSB 3N10A 2JMUA 2EENA 2HZMB 3N0ZA 3SY3A
chains in the Genus database with same CATH superfamily
4H63R 3TJ7A 3G3UA 5A67A 1YEMA 2FJTA 3G3RA 3V85A 5A66A 3G3TA 3G3QA 2ACAA 3N0YA 3C0TA 3BHDA 5A65A 5A64A 3TVLA 3TYPA 2DC4A 5A68A 2FBLA 3G3OA 2GFGA 5A5YA 2HZSB 3N10A 2JMUA 2EENA 2HZMB 3N0ZA 3SY3A
chains in the Genus database with same CATH topology
4H63R 3TJ7A 3G3UA 5A67A 1YEMA 2FJTA 3G3RA 3V85A 5A66A 3G3TA 3G3QA 2ACAA 3N0YA 3C0TA 3BHDA 5A65A 5A64A 3TVLA 3TYPA 2DC4A 5A68A 2FBLA 3G3OA 2GFGA 5A5YA 2HZSB 3N10A 2JMUA 2EENA 2HZMB 3N0ZA 3SY3A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4H63 R;  3TJ7 A;  5A67 A;  1YEM A;  2FJT A;  3V85 A;  5A66 A;  2ACA A;  3N0Y A;  3C0T A;  3BHD A;  5A65 A;  5A64 A;  3TVL A;  3TYP A;  2DC4 A;  5A68 A;  2FBL A;  2GFG A;  5A5Y A;  2HZS B;  3N10 A;  2JMU A;  2EEN A;  2HZM B;  3N0Z A;  3SY3 A; 
#chains in the Genus database with same CATH topology
 4H63 R;  3TJ7 A;  3G3U A;  5A67 A;  1YEM A;  2FJT A;  3G3R A;  3V85 A;  5A66 A;  3G3T A;  3G3Q A;  2ACA A;  3N0Y A;  3C0T A;  3BHD A;  5A65 A;  5A64 A;  3TVL A;  3TYP A;  2DC4 A;  5A68 A;  2FBL A;  3G3O A;  2GFG A;  5A5Y A;  2HZS B;  3N10 A;  2JMU A;  2EEN A;  2HZM B;  3N0Z A;  3SY3 A; 
#chains in the Genus database with same CATH homology
 4H63 R;  3TJ7 A;  3G3U A;  5A67 A;  1YEM A;  2FJT A;  3G3R A;  3V85 A;  5A66 A;  3G3T A;  3G3Q A;  2ACA A;  3N0Y A;  3C0T A;  3BHD A;  5A65 A;  5A64 A;  3TVL A;  3TYP A;  2DC4 A;  5A68 A;  2FBL A;  3G3O A;  2GFG A;  5A5Y A;  2HZS B;  3N10 A;  2JMU A;  2EEN A;  2HZM B;  3N0Z A;  3SY3 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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