5BS5A

Epsp synthase from acinetobacter baumannii
Total Genus 137
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
137
sequence length
445
structure length
441
Chain Sequence
TQQFSILPGNKAFKGKFTVPGDKSVSHRSIMFGAIAEGTTHVTGFLEGEDALATLQAFRDMGVSIEGPKNGEVTIHGVGMHGLKAPASALYMGNSGTSMRLLSGMLSAQKFDSVMTGDASLSKRPMERIAKPLRLMGAQIQTTGEKGTPPVSITGGQQLKGIQYDLPMASAQVKSGILLAGLWAEGETSVTEPEPTRDHTERMLRAFGYDVKTEGNKISLVGGGKLVGTNIQVPSDISSAAFFMVGAAITEGADVVLEAVGINPTRTGVIEILKQMGADLTVENERIAGGEPIADIHIKGSRTLKGIHMPEDQVPLAIDEFPALFIAAACAEGQTVLTGAAELSDRIQVMADGLKIMGIDCTPTEDGIIIEGKGKSGDWSPIFAGGEIESHHDHRIAMSFSMAGLRTSGPITIHGTETVATSFPTFTELANRAGLTIEVSQ
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords 3-phosphoshikimate 1-carboxyvinyltransferase
publication title EPSP synthase from Acinetobacter baumannii
rcsb
source organism Acinetobacter baumannii
total genus 137
structure length 441
sequence length 445
chains with identical sequence B
ec nomenclature ec 2.5.1.19: 3-phosphoshikimate 1-carboxyvinyltransferase.
pdb deposition date 2015-06-01
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.65.10.10 Alpha Beta Alpha-beta prism UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain Enolpyruvate transferase domain 5bs5A02
3.65.10.10 Alpha Beta Alpha-beta prism UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain Enolpyruvate transferase domain 5bs5A01
3SWIA 1NAWA 2GGAA 4E7CA 4E7DA 3UPKA 4GFPA 1G6SA 1X8TA 2PQ9A 3FJZA 4R7UA 2O0XA 1Q36A 2PQBA 4E7EA 3RMTA 4E7BA 5BS5A 1G6TA 2BJBA 1A2NA 3ISSA 1MI4A 2GG6A 1RF5A 2PQCA 4ZNDA 4E7FA 1DLGA 2PQDA 2QFQA 3FK1A 2RL1A 2GG4A 3SG1A 2YVWA 3ROIA 3SWGA 2QFSA 3TR1A 3ZH3A 4EGRA 5U4HA 3V5VA 3LTHA 3ZH4A 3SWAA 5BQ2A 3SWQA 3SWEA 3SWDA 1RYWA 2O0BA 2AAYA 4FQDA 2O0DA 3KR6A 1Q3GA 1RF4A 3NVSA 2Z2CA 3R38A 2QFTA 2O0ZA 2QFUA 1EYNA 1P88A 2AA9A 1UAEA 3SLHA 3VCYA 2O0EA 1P89A 3V4TA 4E7GA 1EJDA 2GGDA 1RF6A 4N3PA 3TI2A 1X8RA 3FJXA 3FK0A 2RL2A 4EIIA 1YBGA 2O15A 3KQJA 3SPBA 1EJCA 5BUFA 3SU9A 3KQAA
chains in the Genus database with same CATH superfamily
3SWIA 1NAWA 2GGAA 1QMHA 4E7CA 4E7DA 3UPKA 4GFPA 1G6SA 1X8TA 4CLQA 2PQ9A 3TUTA 3FJZA 4R7UA 2O0XA 1Q36A 2PQBA 4E7EA 3RMTA 4E7BA 3TUXA 4O89A 5BS5A 1G6TA 2BJBA 1A2NA 3ISSA 1MI4A 2GG6A 1RF5A 2PQCA 4ZNDA 4E7FA 1DLGA 2PQDA 2QFQA 1QMIA 3FK1A 2RL1A 2GG4A 3SG1A 2YVWA 3ROIA 3SWGA 2QFSA 3TR1A 3ZH3A 4EGRA 5U4HA 3V5VA 3LTHA 3ZH4A 3SWAA 5BQ2A 4O8JA 3SWQA 3SWEA 3SWDA 1RYWA 2O0BA 2AAYA 4FQDA 2O0DA 3KR6A 1Q3GA 1RF4A 3NVSA 2Z2CA 3PQVA 3R38A 2QFTA 2O0ZA 2QFUA 1EYNA 1P88A 2AA9A 1UAEA 3SLHA 3VCYA 2O0EA 1P89A 3V4TA 4E7GA 1EJDA 3KGDA 2GGDA 1RF6A 4N3PA 3TI2A 1X8RA 3FJXA 3FK0A 2RL2A 4EIIA 1YBGA 2O15A 3KQJA 3SPBA 1EJCA 5BUFA 3SU9A 3TW3A 3TV1A 3KQAA
chains in the Genus database with same CATH topology
3SWIA 1NAWA 2GGAA 4E7CA 4E7DA 3UPKA 4GFPA 1G6SA 1X8TA 2PQ9A 3FJZA 4R7UA 2O0XA 1Q36A 2PQBA 4E7EA 3RMTA 4E7BA 5BS5A 1G6TA 2BJBA 1A2NA 3ISSA 1MI4A 2GG6A 1RF5A 2PQCA 4ZNDA 4E7FA 1DLGA 2PQDA 2QFQA 3FK1A 2RL1A 2GG4A 3SG1A 2YVWA 3ROIA 3SWGA 2QFSA 3TR1A 3ZH3A 4EGRA 5U4HA 3V5VA 3LTHA 3ZH4A 3SWAA 5BQ2A 3SWQA 3SWEA 3SWDA 1RYWA 2O0BA 2AAYA 4FQDA 2O0DA 3KR6A 1Q3GA 1RF4A 3NVSA 2Z2CA 3R38A 2QFTA 2O0ZA 2QFUA 1EYNA 1P88A 2AA9A 1UAEA 3SLHA 3VCYA 2O0EA 1P89A 3V4TA 4E7GA 1EJDA 2GGDA 1RF6A 4N3PA 3TI2A 1X8RA 3FJXA 3FK0A 2RL2A 4EIIA 1YBGA 2O15A 3KQJA 3SPBA 1EJCA 5BUFA 3SU9A 3KQAA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3SWI A;  1NAW A;  2GGA A;  4E7C A;  4E7D A;  3UPK A;  4GFP A;  1G6S A;  1X8T A;  2PQ9 A;  3FJZ A;  4R7U A;  2O0X A;  1Q36 A;  2PQB A;  4E7E A;  3RMT A;  4E7B A;  5BS5 A;  1G6T A;  2BJB A;  1A2N A;  3ISS A;  1MI4 A;  2GG6 A;  1RF5 A;  2PQC A;  4ZND A;  4E7F A;  1DLG A;  2PQD A;  2QFQ A;  3FK1 A;  2RL1 A;  2GG4 A;  3SG1 A;  2YVW A;  3ROI A;  3SWG A;  2QFS A;  3TR1 A;  3ZH3 A;  4EGR A;  5U4H A;  3V5V A;  3LTH A;  3ZH4 A;  3SWA A;  5BQ2 A;  3SWQ A;  3SWE A;  3SWD A;  1RYW A;  2O0B A;  2AAY A;  4FQD A;  2O0D A;  3KR6 A;  1Q3G A;  1RF4 A;  3NVS A;  2Z2C A;  3R38 A;  2QFT A;  2O0Z A;  2QFU A;  1EYN A;  1P88 A;  2AA9 A;  1UAE A;  3SLH A;  3VCY A;  2O0E A;  1P89 A;  3V4T A;  4E7G A;  1EJD A;  2GGD A;  1RF6 A;  4N3P A;  3TI2 A;  1X8R A;  3FJX A;  3FK0 A;  2RL2 A;  4EII A;  1YBG A;  2O15 A;  3KQJ A;  3SPB A;  1EJC A;  5BUF A;  3SU9 A;  3KQA A; 
#chains in the Genus database with same CATH topology
 3SWI A;  1NAW A;  2GGA A;  1QMH A;  4E7C A;  4E7D A;  3UPK A;  4GFP A;  1G6S A;  1X8T A;  4CLQ A;  2PQ9 A;  3TUT A;  3FJZ A;  4R7U A;  2O0X A;  1Q36 A;  2PQB A;  4E7E A;  3RMT A;  4E7B A;  3TUX A;  4O89 A;  5BS5 A;  1G6T A;  2BJB A;  1A2N A;  3ISS A;  1MI4 A;  2GG6 A;  1RF5 A;  2PQC A;  4ZND A;  4E7F A;  1DLG A;  2PQD A;  2QFQ A;  1QMI A;  3FK1 A;  2RL1 A;  2GG4 A;  3SG1 A;  2YVW A;  3ROI A;  3SWG A;  2QFS A;  3TR1 A;  3ZH3 A;  4EGR A;  5U4H A;  3V5V A;  3LTH A;  3ZH4 A;  3SWA A;  5BQ2 A;  4O8J A;  3SWQ A;  3SWE A;  3SWD A;  1RYW A;  2O0B A;  2AAY A;  4FQD A;  2O0D A;  3KR6 A;  1Q3G A;  1RF4 A;  3NVS A;  2Z2C A;  3PQV A;  3R38 A;  2QFT A;  2O0Z A;  2QFU A;  1EYN A;  1P88 A;  2AA9 A;  1UAE A;  3SLH A;  3VCY A;  2O0E A;  1P89 A;  3V4T A;  4E7G A;  1EJD A;  3KGD A;  2GGD A;  1RF6 A;  4N3P A;  3TI2 A;  1X8R A;  3FJX A;  3FK0 A;  2RL2 A;  4EII A;  1YBG A;  2O15 A;  3KQJ A;  3SPB A;  1EJC A;  5BUF A;  3SU9 A;  3TW3 A;  3TV1 A;  3KQA A; 
#chains in the Genus database with same CATH homology
 3SWI A;  1NAW A;  2GGA A;  4E7C A;  4E7D A;  3UPK A;  4GFP A;  1G6S A;  1X8T A;  2PQ9 A;  3FJZ A;  4R7U A;  2O0X A;  1Q36 A;  2PQB A;  4E7E A;  3RMT A;  4E7B A;  5BS5 A;  1G6T A;  2BJB A;  1A2N A;  3ISS A;  1MI4 A;  2GG6 A;  1RF5 A;  2PQC A;  4ZND A;  4E7F A;  1DLG A;  2PQD A;  2QFQ A;  3FK1 A;  2RL1 A;  2GG4 A;  3SG1 A;  2YVW A;  3ROI A;  3SWG A;  2QFS A;  3TR1 A;  3ZH3 A;  4EGR A;  5U4H A;  3V5V A;  3LTH A;  3ZH4 A;  3SWA A;  5BQ2 A;  3SWQ A;  3SWE A;  3SWD A;  1RYW A;  2O0B A;  2AAY A;  4FQD A;  2O0D A;  3KR6 A;  1Q3G A;  1RF4 A;  3NVS A;  2Z2C A;  3R38 A;  2QFT A;  2O0Z A;  2QFU A;  1EYN A;  1P88 A;  2AA9 A;  1UAE A;  3SLH A;  3VCY A;  2O0E A;  1P89 A;  3V4T A;  4E7G A;  1EJD A;  2GGD A;  1RF6 A;  4N3P A;  3TI2 A;  1X8R A;  3FJX A;  3FK0 A;  2RL2 A;  4EII A;  1YBG A;  2O15 A;  3KQJ A;  3SPB A;  1EJC A;  5BUF A;  3SU9 A;  3KQA A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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