5FUFA

Crystal structure of the mep2 mutant s453d from candida albicans
Total Genus 187
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
187
sequence length
452
structure length
449
Chain Sequence
QFTGTGTGGDVFKVDLNEQFDRADMVWIGTASVLVWIMIPGVGLLYSGISRKKHALSLMWAALMAACVAAFQWFWWGYSLVFAHNGSVFLGTLQNFCLKDVLGAPSIVKTVPDILFCLYQGMFAAVTAILMAGAGCERARLGPMMVFLFIWLTVVYCPIAYWTWGGNGWLVSLGALDFAGGGPVHENSGFAALAYSLWLGKRHDPVAKGKVPKYKPHSVSSIVMGTIFLWFGWYGFNGGSTGNSSMRSWYACVNTNLAAATGGLTWMLVDWFRTGGKWSTVGLCMGAIAGLVGITPAAGYVPVYTSVIFGIVPAIICNFAVDLKDLLQIDDGMDVWALHGVGGFVGNFMTGLFAADYVAMIDGTEIDGGWMNHHWKQLGYQLAGSCAVAAWSFTVTSIILLAMDRIPFLRIRLHEDEEMLGTDLGEYAYYADDDPETNPYVLEPIRDTT
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transport
molecule keywords AMMONIUM TRANSPORTER
publication title Structural Basis for Mep2 Ammonium Transceptor Activation by Phosphorylation.
pubmed doi rcsb
source organism Candida albicans
total genus 187
structure length 449
sequence length 452
ec nomenclature
pdb deposition date 2016-01-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00909 Ammonium_transp Ammonium Transporter Family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.3430.10 Mainly Alpha Orthogonal Bundle Ammonium transporter fold Ammonium transporter AmtB like domains 5fufA00
2NPEA 2NPKA 5AF1A 2NPCA 4EZCA 5AEXA 2NOWA 1U7GA 2B2HA 1U77A 5FUFA 3M6EA 1XQEA 3B9WA 5AH3A 2NUUA 2NPDA 1U7CA 3K3FA 5AIDA 4EZDA 2B2IA 3HD6A 3K3GA 2NPGA 1XQFA 2NMRA 3BHSA 2B2FA 3B9YA 4NH2A 2NPJA 2NS1A 2NOPA 3C1GA 3ME1A 2B2JA 3C1JA 3C1HA 5AEZA 3B9ZA 3C1IA
chains in the Genus database with same CATH superfamily
2NPEA 2NPKA 5AF1A 2NPCA 4EZCA 5AEXA 2NOWA 1U7GA 2B2HA 1U77A 5FUFA 3M6EA 1XQEA 3B9WA 5AH3A 2NUUA 2NPDA 1U7CA 3K3FA 5AIDA 4EZDA 2B2IA 3HD6A 3K3GA 2NPGA 1XQFA 2NMRA 3BHSA 2B2FA 3B9YA 4NH2A 2NPJA 2NS1A 2NOPA 3C1GA 3ME1A 2B2JA 3C1JA 3C1HA 5AEZA 3B9ZA 3C1IA
chains in the Genus database with same CATH topology
2NPEA 2NPKA 5AF1A 2NPCA 4EZCA 5AEXA 2NOWA 1U7GA 2B2HA 1U77A 5FUFA 3M6EA 1XQEA 3B9WA 5AH3A 2NUUA 2NPDA 1U7CA 3K3FA 5AIDA 4EZDA 2B2IA 3HD6A 3K3GA 2NPGA 1XQFA 2NMRA 3BHSA 2B2FA 3B9YA 4NH2A 2NPJA 2NS1A 2NOPA 3C1GA 3ME1A 2B2JA 3C1JA 3C1HA 5AEZA 3B9ZA 3C1IA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2NPE A;  2NPK A;  5AF1 A;  2NPC A;  4EZC A;  5AEX A;  2NOW A;  1U7G A;  2B2H A;  1U77 A;  5FUF A;  3M6E A;  1XQE A;  3B9W A;  5AH3 A;  2NUU A;  2NPD A;  1U7C A;  3K3F A;  5AID A;  4EZD A;  2B2I A;  3HD6 A;  3K3G A;  2NPG A;  1XQF A;  2NMR A;  3BHS A;  2B2F A;  3B9Y A;  4NH2 A;  2NPJ A;  2NS1 A;  2NOP A;  3C1G A;  3ME1 A;  2B2J A;  3C1J A;  3C1H A;  5AEZ A;  3B9Z A;  3C1I A; 
#chains in the Genus database with same CATH topology
 2NPE A;  2NPK A;  5AF1 A;  2NPC A;  4EZC A;  5AEX A;  2NOW A;  1U7G A;  2B2H A;  1U77 A;  5FUF A;  3M6E A;  1XQE A;  3B9W A;  5AH3 A;  2NUU A;  2NPD A;  1U7C A;  3K3F A;  5AID A;  4EZD A;  2B2I A;  3HD6 A;  3K3G A;  2NPG A;  1XQF A;  2NMR A;  3BHS A;  2B2F A;  3B9Y A;  4NH2 A;  2NPJ A;  2NS1 A;  2NOP A;  3C1G A;  3ME1 A;  2B2J A;  3C1J A;  3C1H A;  5AEZ A;  3B9Z A;  3C1I A; 
#chains in the Genus database with same CATH homology
 2NPE A;  2NPK A;  5AF1 A;  2NPC A;  4EZC A;  5AEX A;  2NOW A;  1U7G A;  2B2H A;  1U77 A;  5FUF A;  3M6E A;  1XQE A;  3B9W A;  5AH3 A;  2NUU A;  2NPD A;  1U7C A;  3K3F A;  5AID A;  4EZD A;  2B2I A;  3HD6 A;  3K3G A;  2NPG A;  1XQF A;  2NMR A;  3BHS A;  2B2F A;  3B9Y A;  4NH2 A;  2NPJ A;  2NS1 A;  2NOP A;  3C1G A;  3ME1 A;  2B2J A;  3C1J A;  3C1H A;  5AEZ A;  3B9Z A;  3C1I A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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