5JO1B

Crystal structure of phaseic acid-bound abscisic acid receptor pyl3 in complex with type 2c protein phosphatase hab1
Total Genus 91
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
91
sequence length
321
structure length
299
Chain Sequence
CIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVIDLKAQRK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Signaling protein/hydrolase
molecule keywords Protein phosphatase 2C 16
publication title Co-evolution of Hormone Metabolism and Signaling Networks Expands Plant Adaptive Plasticity.
pubmed doi rcsb
source organism Arabidopsis thaliana
total genus 91
structure length 299
sequence length 321
ec nomenclature ec 3.1.3.16: Protein-serine/threonine phosphatase.
pdb deposition date 2016-05-01

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF00481 PP2C Protein phosphatase 2C
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.40.10 Alpha Beta 4-Layer Sandwich Phosphatase 2c; domain 1 PPM-type phosphatase domain 5jo1B00
4N0GA 2I44A 3W42A 4JNDA 2J4OA 1A6QA 4DA1A 2JFTA 3D8KA 3FXLA 4LG5B 4LGAB 4LA7B 3ES2A 2IQ1A 3KDJB 1TXOA 3UJLB 2I0OA 3EQ2A 3KB3B 2J86A 3QN1B 3F79A 3W41A 2J82A 5D2UA 3JRQA 3FXMA 2ISNA 3FXJA 4RAGA 3RT0A 3W43A 3PU9A 2POPA 3NMTB 3ZVUB 2PNQA 2IRMA 2JFRA 3FXOA 3UJGB 3T91A 3W44A 3NMNB 2V06A 4LGBB 3KE6A 2PK0A 4OICB 5F1MA 4DS8B 5JO1B 5ITIA 4WVOB 3MQ3A 5JO2B 4RAFA 4YZHA 4RA2A 3T9QA 3NMVB 2CM1A 3UJKA 3W40A 3ZT9A 2JFSA 3N3CA 3W45A 3RNRA 2Y09A 3FXKA 4YZGA 2P8EA 2POMA 2XZVA
chains in the Genus database with same CATH superfamily
4N0GA 2I44A 3W42A 4JNDA 2J4OA 1A6QA 4DA1A 2JFTA 3D8KA 3FXLA 4LG5B 4LGAB 4LA7B 3ES2A 2IQ1A 3KDJB 1TXOA 3UJLB 2I0OA 3EQ2A 3KB3B 2J86A 3QN1B 3F79A 3W41A 2J82A 5D2UA 3JRQA 3FXMA 2ISNA 3FXJA 4RAGA 3RT0A 3W43A 3PU9A 2POPA 3NMTB 3ZVUB 2PNQA 2IRMA 2JFRA 3FXOA 3UJGB 3T91A 3W44A 3NMNB 2V06A 4LGBB 3KE6A 2PK0A 4OICB 5F1MA 4IIPA 4DS8B 5JO1B 5ITIA 4WVOB 3MQ3A 5JO2B 4RAFA 4YZHA 4RA2A 3T9QA 3NMVB 2CM1A 3UJKA 4IIKA 3W40A 3ZT9A 2JFSA 3N3CA 3W45A 3RNRA 2Y09A 3FXKA 4YZGA 2P8EA 2POMA 2XZVA
chains in the Genus database with same CATH topology
4N0GA 2I44A 3W42A 4JNDA 2J4OA 1A6QA 4DA1A 2JFTA 3D8KA 3FXLA 4LG5B 4LGAB 4LA7B 3ES2A 2IQ1A 3KDJB 1TXOA 3UJLB 2I0OA 3EQ2A 3KB3B 2J86A 3QN1B 3F79A 3W41A 2J82A 5D2UA 3JRQA 3FXMA 2ISNA 3FXJA 4RAGA 3RT0A 3W43A 3PU9A 2POPA 3NMTB 3ZVUB 2PNQA 2IRMA 2JFRA 3FXOA 3UJGB 3T91A 3W44A 3NMNB 2V06A 4LGBB 3KE6A 2PK0A 4OICB 5F1MA 4DS8B 5JO1B 5ITIA 4WVOB 3MQ3A 5JO2B 4RAFA 4YZHA 4RA2A 3T9QA 3NMVB 2CM1A 3UJKA 3W40A 3ZT9A 2JFSA 3N3CA 3W45A 3RNRA 2Y09A 3FXKA 4YZGA 2P8EA 2POMA 2XZVA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4N0G A;  2I44 A;  3W42 A;  4JND A;  2J4O A;  1A6Q A;  4DA1 A;  2JFT A;  3D8K A;  3FXL A;  4LG5 B;  4LGA B;  4LA7 B;  3ES2 A;  2IQ1 A;  3KDJ B;  1TXO A;  3UJL B;  2I0O A;  3EQ2 A;  3KB3 B;  2J86 A;  3QN1 B;  3F79 A;  3W41 A;  2J82 A;  5D2U A;  3JRQ A;  3FXM A;  2ISN A;  3FXJ A;  4RAG A;  3RT0 A;  3W43 A;  3PU9 A;  2POP A;  3NMT B;  3ZVU B;  2PNQ A;  2IRM A;  2JFR A;  3FXO A;  3UJG B;  3T91 A;  3W44 A;  3NMN B;  2V06 A;  4LGB B;  3KE6 A;  2PK0 A;  4OIC B;  5F1M A;  4DS8 B;  5JO1 B;  5ITI A;  4WVO B;  3MQ3 A;  5JO2 B;  4RAF A;  4YZH A;  4RA2 A;  3T9Q A;  3NMV B;  2CM1 A;  3UJK A;  3W40 A;  3ZT9 A;  2JFS A;  3N3C A;  3W45 A;  3RNR A;  2Y09 A;  3FXK A;  4YZG A;  2P8E A;  2POM A;  2XZV A; 
#chains in the Genus database with same CATH topology
 4N0G A;  2I44 A;  3W42 A;  4JND A;  2J4O A;  1A6Q A;  4DA1 A;  2JFT A;  3D8K A;  3FXL A;  4LG5 B;  4LGA B;  4LA7 B;  3ES2 A;  2IQ1 A;  3KDJ B;  1TXO A;  3UJL B;  2I0O A;  3EQ2 A;  3KB3 B;  2J86 A;  3QN1 B;  3F79 A;  3W41 A;  2J82 A;  5D2U A;  3JRQ A;  3FXM A;  2ISN A;  3FXJ A;  4RAG A;  3RT0 A;  3W43 A;  3PU9 A;  2POP A;  3NMT B;  3ZVU B;  2PNQ A;  2IRM A;  2JFR A;  3FXO A;  3UJG B;  3T91 A;  3W44 A;  3NMN B;  2V06 A;  4LGB B;  3KE6 A;  2PK0 A;  4OIC B;  5F1M A;  4IIP A;  4DS8 B;  5JO1 B;  5ITI A;  4WVO B;  3MQ3 A;  5JO2 B;  4RAF A;  4YZH A;  4RA2 A;  3T9Q A;  3NMV B;  2CM1 A;  3UJK A;  4IIK A;  3W40 A;  3ZT9 A;  2JFS A;  3N3C A;  3W45 A;  3RNR A;  2Y09 A;  3FXK A;  4YZG A;  2P8E A;  2POM A;  2XZV A; 
#chains in the Genus database with same CATH homology
 4N0G A;  2I44 A;  3W42 A;  4JND A;  2J4O A;  1A6Q A;  4DA1 A;  2JFT A;  3D8K A;  3FXL A;  4LG5 B;  4LGA B;  4LA7 B;  3ES2 A;  2IQ1 A;  3KDJ B;  1TXO A;  3UJL B;  2I0O A;  3EQ2 A;  3KB3 B;  2J86 A;  3QN1 B;  3F79 A;  3W41 A;  2J82 A;  5D2U A;  3JRQ A;  3FXM A;  2ISN A;  3FXJ A;  4RAG A;  3RT0 A;  3W43 A;  3PU9 A;  2POP A;  3NMT B;  3ZVU B;  2PNQ A;  2IRM A;  2JFR A;  3FXO A;  3UJG B;  3T91 A;  3W44 A;  3NMN B;  2V06 A;  4LGB B;  3KE6 A;  2PK0 A;  4OIC B;  5F1M A;  4DS8 B;  5JO1 B;  5ITI A;  4WVO B;  3MQ3 A;  5JO2 B;  4RAF A;  4YZH A;  4RA2 A;  3T9Q A;  3NMV B;  2CM1 A;  3UJK A;  3W40 A;  3ZT9 A;  2JFS A;  3N3C A;  3W45 A;  3RNR A;  2Y09 A;  3FXK A;  4YZG A;  2P8E A;  2POM A;  2XZV A; 
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