5MCKA

Radiation damage to gh7 family cellobiohydrolase from daphnia pulex: dose (dwd) 16.2 mgy
Total Genus 130
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
130
sequence length
445
structure length
442
Chain Sequence
ENVGTQAAEEPLNLPISVCTAPGNCQTEADAVVLDSNWRWAHTTTGYTNCYTGNLWDTTLCPTPETCTTNCAIDGVPLADWSGTYGGSVTGNKFNLKFVTVSTNIGARTFLLDSTKTRYRMFQLLNREFTYDVDVSSLDCGLNGALYFVSMDADGGAAKYPTNKGGAKYGTGYCDAQCPHDVKWINGLANSKDWTPIPGDANSGKGYYGNCCAELDIWEANKQSQAFTTHPCTPNDQTRCEGVVCGDNDSGDRYNGMCDKDGCDFASYRMNDHTFYGPGSTFKLDSTKPFTVVSQFITTDGTDNGDFKEFRRFYVQNGVRIENSKVNFPGITAYDSITDEMCAATKGLFGDLDDHKNKGGMKQMGEAMRKGMALVMSIWDDHDVNMLWLDSNYPPTGNPSTPGVARGPCPTTSGVPSEVEVTQANAVVSFGNIKFGPIGSTV
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase
molecule keywords Cellobiohydrolase CHBI
publication title OH cleavage from tyrosine: debunking a myth.
pubmed doi rcsb
source organism Daphnia pulex
total genus 130
structure length 442
sequence length 445
chains with identical sequence B
ec nomenclature ec 3.2.1.91: Cellulose 1,4-beta-cellobiosidase (non-reducing end).
pdb deposition date 2016-11-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00840 Glyco_hydro_7 Glycosyl hydrolase family 7
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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