5MYDA

Convergent evolution involving dimeric and trimeric dutpases in signalling.
Total Genus 62
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
62
sequence length
160
structure length
160
Chain Sequence
MTNTLTTDQLQELLQIQKEFDDRIPTLNLGDSKIAYVVEFFEWFNTLETFKNWKKKPGKPLDVQLDELADILAFGLSIANQQGFEEYDRDLFFESFDEEYFLDFPYLRNQDMIYDMMSEFYDDDLTSIRRLVIVFKIAEQLYTIDQLIDAYKKKMKRNHE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords DUTPase
publication title Convergent evolution involving dimeric and trimeric dUTPases in pathogenicity island mobilization.
pubmed doi rcsb
source organism Staphylococcus sp. hmsc068c09
total genus 62
structure length 160
sequence length 160
chains with identical sequence B, C, D
ec nomenclature ec 3.6.1.23: dUTP diphosphatase.
pdb deposition date 2017-01-26
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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