5NCTA

Structure of the trypsin induced serpin-type proteinase inhibitor, miropin.
Total Genus 112
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
112
sequence length
325
structure length
325
Chain Sequence
DNAFAFDLLQTTRKHVTEANVFISPLSVSMALNMTLNGAAGVTADEMKTALRETGYTMEDINEYSHSLREALLKVDPSTTIGMANSIWYKQGELVKEPFILANRTHYDAEVKAVDFSSPATLPAINGWCAQKTNDKITKILDYIPGNAFMYLINAVYFKGIWVTQFKKSDTKRAPFRKADGTTQEVNMMAQKSTFGYTTDECCQYLEMDYGNKAFSMIVMLPNEGQTTRDVIEQLDNKHWSMIIKGIRPTQVSLRMPRFKTECKYGLEKKILPEMGMNVPFTETADFPGITDAAIFISRVIHKTFVQVDEEGTEAAAVTAVEMVK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase inhibitor
molecule keywords Serpin-type proteinase inhibitor, miropin
publication title A structure-derived snap-trap mechanism of a multispecific serpin from the dysbiotic human oral microbiome.
pubmed doi rcsb
source organism Tannerella forsythia
total genus 112
structure length 325
sequence length 325
ec nomenclature
pdb deposition date 2017-03-06
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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