5V7QH

Cryo-em structure of the large ribosomal subunit from mycobacterium tuberculosis bound with a potent linezolid analog
Total Genus 6
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
6
sequence length
47
structure length
47
Chain Sequence
MKLILTADVDHLGSIGDTVEVKDGYGRNFLLPRGLAIVASRGAQKQA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Ribosome
molecule keywords 50S ribosomal protein L32
publication title Structural insights into species-specific features of the ribosome from the human pathogen Mycobacterium tuberculosis.
pubmed doi rcsb
total genus 6
structure length 47
sequence length 47
ec nomenclature
pdb deposition date 2017-03-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
H PF01281 Ribosomal_L9_N Ribosomal protein L9, N-terminal domain
H PF03948 Ribosomal_L9_C Ribosomal protein L9, C-terminal domain
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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