5XTHL

Cryo-em structure of human respiratory supercomplex i1iii2iv1
Total Genus 14
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
14
sequence length
118
structure length
118
Chain Sequence
b'KLDITTLTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWASTADPLSNMVLTFSTKEDAVSFAEKNGWSYDIEERKVPKPKSKSYGANFSWNKRTRVSTK'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondria
publication title Architecture of Human Mitochondrial Respiratory Megacomplex I2III2IV2.
pubmed doi rcsb
molecule tags Oxidoreductase/electron transport
total genus 14
structure length 118
sequence length 118
ec nomenclature
pdb deposition date 2017-06-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
L PF04800 ETC_C1_NDUFA4 ETC complex I subunit conserved region
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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