6ADLC

Anthrax toxin receptor 1-bound spent particles of seneca valley virus in acidic conditions
Total Genus 29
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
29
sequence length
238
structure length
230
Chain Sequence
GPIPTAPRENSLMFLSTTPDDTVPAYGNVRTPPVNYLPGEITDLLQLARIPTLMAFGRDAYVPYVAVPTQFDDKPLISFPITLSDPVYQNTLVGAISSNFANYRGCIQITLTFCGPMMARGKFLLSYSPPNGTQPQTLSEAMQCTYSIWDIGLNSSWTFVIPYISPSDYRETRAITNSVYSADGWFSLHKLTKITLPPDCPQSPCILFFASAGEDYTLRLPVDCNPSYVF
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Virus
molecule keywords VP1
publication title Seneca Valley virus attachment and uncoating mediated by its receptor anthrax toxin receptor 1.
pubmed doi rcsb
source organism Homo sapiens
total genus 29
structure length 230
sequence length 238
ec nomenclature
pdb deposition date 2018-08-01
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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