6AHUK

Cryo-em structure of human ribonuclease p with mature trna
Total Genus 19
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
19
sequence length
121
structure length
121
Chain Sequence
PVKDREAFQRLNFLYQAAHCVLAQDPENQALARFYCYTERTIAKRLVLRRDPSVKRTLCRGCSSLLVPGLTCTQRQRRCRGQRWTVQTCLTCQRSQRFLNDPGHLLWGDRPEAQLGSQADS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase/rna
molecule keywords H1 RNA
publication title Cryo-EM Structure of the Human Ribonuclease P Holoenzyme.
pubmed doi rcsb
source organism Homo sapiens
total genus 19
structure length 121
sequence length 121
ec nomenclature ec 3.1.26.5: Ribonuclease P.
pdb deposition date 2018-08-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
K PF04032 Rpr2 RNAse P Rpr2/Rpp21/SNM1 subunit domain
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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