6D3RA

Thermostablilized dephosphorylated chicken cftr
Total Genus 419
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
419
sequence length
1368
structure length
1127
Chain Sequence
SADSADNLSEKLEREWDRELATSKKKPKLINALRRCFFWKFMFYGILLYLGEVTKSVQPLLLGRIIASYDPDNSSERSIAYYLGIGLCLLFLVRTLLIHPSIFGLHHIGMQIRIALFSLIYKKTLKLSSKVLDKISTGQLVSLLSNNLNKFDEGLALAHFVWIAPLQVALLMGLLWDMLQASAFAGLAFLIVMAFFQAWLGQMMMKYRDKRAGKINERLVITSEIIENIQSVKAYCWEDAMEKMIESLRETELKLTRKAAYVRYFNSSAFFFSGFFVVFLAVVPYAVTKGIILRKIFTTISFCIVLRMTVTRQFPGSVQTWYDSIGAINKIQDFLLKEEYKALEYNLTTTGVEVDKVTAFWDEHASPVLQDINFKIEKGELLAVSGSTGSGKTSLLMLIMGELEPSEGKIKHSGRISFSPQVSWIMPGTIKENIIFGVSYDEYRYKSVIQACQLEEDILKFPDKDYTVLGEGGIILSGGQRARISLARAVYKDADLYLMDSPFGYLDIFTEKEIFESCVCKLMANKTRILVTSKLEHLKIADKILILHEGSCYFYGTFSELQGQRPDFSSELMGFDSFDQFSAERRNSIITETLRRFSFWNTYFRYITIHKSLIFVLILCVTIFLLEVAASLVLLLFLYYMIYIYVGIADTLLAMGIFRGLPLVHTLITVSKTLHQKMVHAVLYAPMSTFNSLKAGGILNRFSKDTAILDDLLPLTVFDLIQLILIVIGAITVVSILQPYIFLASVPVIAAFIVLRAYFLHTSQQLKQLESEARSPIFTHLVTSLKGLWTLRAFGRQPYFETLFHKALNLHTANWFLYLSTLRWFQMRIEMIFVVFFSAVAFISIITTGDGPGRVGIILTLAMNIMGTLQWAVNSSIDVDSLMRSVSRIFKFIDGGQMTVTDLTARYTEGGTAVLENISFSISSGQTVGLLGRTGSGKSTLLFAFLRLLNTEGDIQIDGVSWNTVSLQQWRKAFGVIPQKVFIFSGTFRKNLDPYGQWNDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITSQVIRKTLKHAFADCTVVLSESRLEAILECQRFLVIEDNKMRQYESIQKLLSEKSSLRQ
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Membrane protein
molecule keywords Cystic fibrosis transmembrane conductance regulator
publication title Cryo-EM Visualization of an Active High Open Probability CFTR Anion Channel.
pubmed doi rcsb
source organism Gallus gallus
total genus 419
structure length 1127
sequence length 1368
ec nomenclature ec 3.6.3.49: Transferred entry: 5.6.1.6.
pdb deposition date 2018-04-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00005 ABC_tran ABC transporter
A PF00664 ABC_membrane ABC transporter transmembrane region
A PF00664 ABC_membrane ABC transporter transmembrane region
A PF14396 CFTR_R Cystic fibrosis TM conductance regulator (CFTR), regulator domain
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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