6ETZA

Cold-adapted beta-d-galactosidase from arthrobacter sp. 32cb
Total Genus 310
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
310
sequence length
989
structure length
989
Chain Sequence
GRSLELGAADIQDLESFEAGRGALPARAYLQSDAPRLSLNGEWQFRLSPGSRVAPDDGWQLGEALNGFESLPVPSSWPMHGHGAPAYTNVQFPFAVEPPHVPEANPIGDHLVVFEAGPEFFPHALLRFDGIESAGTVWLNGVELGTTRGSRLAHEFDVSGILEQGENTLAVRVAQFSAASYVEDQDMWWLPGIFRDVTLQARPAAGIDDVFVHAGYDHITGEGILKVEASRGGQAIDAVVRVPELALELAAGTEVRVPAVEPWSAEVPKLYEAAVSAAGESVALQIGFRSIAIEDAQFKVNGRRILLRGVNRHEHHPRLGRVVPRDVVEAELRLMKQHNINAIRTSHYPPHPQFLALADQLGFYVVLECDLETHGFESAGWAQNPSDDPQWEDALVDRMRRTVERDKNHASVVMWSLGNEAGTGRNLAAMSRWTKDRDPSRPIHYEGDWSSEHVDVYSRMYASQAETALIGQGIEPALNDAALDARRRAMPFVLCEYVHAMGNGPGGMSEYQALFEKYPRLMGGFVWEWLEHGITVSTADGVDHYGYGGDFGEEVHDGNFVTDGLVDADRRPRPGLLDFKKVIEPLRIDVARDWTGFTLRNGQDFADTSAFSFRYEVEADGGALDGGTVDVAPVAPQSETVVELPGSVAALAAGLSDGRPAVLTVRAVLGADSAWADAGHEVAWGQSVREPGAPVPPAPVEPVQVQDSELTLGPVVFSRATGMPTSIGGVPVEKLGLTLWWAPTDNDLGREWGGADERPLATQWKDAGLNRLHTRLLGISANPGQDGGETLTVRTRVSAADKQYGVLVDYTWSTDGETVGLRTQVRRDGTWVNRGFEVEWARIGLEFVLGEETELVSWFGQGPHQSYPDTGQGARAGWFSLPLAKMDVEYVRPQECGARSGSRSAALQLGGRTLEICGDPFALTVRPYSQDVLDAAAHRPDLKADGRTYLYVDHALRGVGTAACGPGVLEQYRLKPRDADFILTLKVRS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase
molecule keywords Beta-galactosidase
publication title In Situ Random Microseeding and Streak Seeding Used for Growth of Crystals of Cold-Adapted Beta-D-Galactosidases: Crystal Structure of BetaDG from Arthrobacter sp. 32cB
doi rcsb
source organism Arthrobacter sp. 32cb
total genus 310
structure length 989
sequence length 989
ec nomenclature ec 3.2.1.23: Beta-galactosidase.
pdb deposition date 2017-10-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02836 Glyco_hydro_2_C Glycosyl hydrolases family 2, TIM barrel domain
A PF02837 Glyco_hydro_2_N Glycosyl hydrolases family 2, sugar binding domain
A PF02929 Bgal_small_N Beta galactosidase small chain
A PF16353 DUF4981 Domain of unknown function(DUF4981)
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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