6F44N

Rna polymerase iii closed complex cc2.
Total Genus 7
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
7
sequence length
149
structure length
104
Chain Sequence
KEAAAELELLNADHQHILRKLKKMNNKPERFMVFQLPTRLPVGSIRVHKSGKLSVKIGNVVMDIGKGAETTFLQDVIALSIADDASSAELLGRVDGKIVVTPQI
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transcription
molecule keywords DNA-directed RNA polymerase III subunit RPC1
publication title Molecular mechanism of promoter opening by RNA polymerase III.
pubmed doi rcsb
source organism Saccharomyces cerevisiae (strain atcc 204508 / s288c)
total genus 7
structure length 104
sequence length 149
ec nomenclature
pdb deposition date 2017-11-29

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
N PF05132 RNA_pol_Rpc4 RNA polymerase III RPC4
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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