6GL0A

Structure of zgengagh5_4 in complex with a cellotriose
Total Genus 140
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
140
sequence length
331
structure length
331
Chain Sequence
SNMREIAPKEFVLDMGAGWNLGNAMDTYNSDETAWGNPLTTKAMIDEIAKMGFKTLRLPVTWKFHIGEGPDYLIEANWLDKVEAIANFALENEMYVIINIHHDETWILPTYEKADEVKDELSKVWTQIANRFKTYGDYLIFETLNEPRHKGTPEEWKGGTQEGRDAVNQYHQVSVDAIRATGGNNAKRKIMVSTYAASTASNALNDYLVPNGDKNVIVSVHSYFPYQFCLDGTDSTWGTEADKTALLAELDKIRDKFIVEDNRAVVMGSWGSTFSDNPEDRLAHAEFYARACAERGICPIWWDNGNVDEFGIFNRNTLEWNYPEIAEAIVK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords Endoglucanase, family GH5
publication title The laterally acquired GH5ZgEngAGH5_4from the marine bacteriumZobellia galactanivoransis dedicated to hemicellulose hydrolysis.
pubmed doi rcsb
source organism Zobellia galactanivorans
total genus 140
structure length 331
sequence length 331
chains with identical sequence B, C
ec nomenclature ec 3.2.1.4: Cellulase.
pdb deposition date 2018-05-22

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00150 Cellulase Cellulase (glycosyl hydrolase family 5)
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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