6GZ4BV

Trna translocation by the eukaryotic 80s ribosome and the impact of gtp hydrolysis, translocation-intermediate-post-2 (ti-post-2)
Total Genus 9
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
9
sequence length
81
structure length
81
Chain Sequence
b'MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSILRLAKADGIVSK'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords ribosomal protein uL2
publication title tRNA Translocation by the Eukaryotic 80S Ribosome and the Impact of GTP Hydrolysis.
pubmed doi rcsb
molecule tags Ribosome
total genus 9
structure length 81
sequence length 81
ec nomenclature
pdb deposition date 2018-07-03
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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