6H1WA

Crystal structure of protein mj1004 from mathanocaldococcus jannaschii
Total Genus 58
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
58
sequence length
205
structure length
205
Chain Sequence
MKVRDLMDKNFAKIYVDETVEDAINLLKKKKRFSAPIVDKEDRLVGWVTTLELLGISEKDFKKPITEFMRPVEEVITVYEDDEARNVVLKFVKYKVVSIPVLTRDGRVIGMVRNCDVVKTLAKLYEIPVYKIFKELHNHIGDISWEELMEAAAVVTKRMTGEDITPQEYEERIKKTTFGKAIWACGGLEKFFVGLIEIGMVALAR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Unknown function
molecule keywords MJ1004
publication title Crystal Structure of protein MJ1004 from Mathanocaldococcus jannaschii
rcsb
source organism Methanocaldococcus jannaschii dsm 2661
total genus 58
structure length 205
sequence length 205
chains with identical sequence B
ec nomenclature
pdb deposition date 2018-07-12
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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