6HWHQ

Structure of a functional obligate respiratory supercomplex from mycobacterium smegmatis
Total Genus 157
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
157
sequence length
550
structure length
550
Chain Sequence
LLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMALLLRTELAVPGLQFLSNEQYNQLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPRLNALSFWLFLFGASIALGGFLAPGGPADFGWTAYTPLSNAMHSPGAGGDLWIFGLIVGGLGTILGAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNLGAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYATISIGALSIAVWAHHLYATGAVLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPMLFSVGFLVTFLLGGLTGVILASPPLDFHVTDSYFVVAHFHYVLFGTIVFATYAGVYFWFPKMTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIGSFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSERPAFELHYPHMIERLRAESHP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Electron transport
molecule keywords Ubiquinol-cytochrome c reductase iron-sulfur subunit
publication title Structure of a functional obligate complex III2IV2respiratory supercomplex from Mycobacterium smegmatis.
pubmed doi rcsb
source organism Mycobacterium smegmatis mc2 155
total genus 157
structure length 550
sequence length 550
chains with identical sequence V
ec nomenclature ec 1.9.3.1: Cytochrome-c oxidase.
pdb deposition date 2018-10-12

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
Q PF00115 COX1 Cytochrome C and Quinol oxidase polypeptide I
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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