6I9Rp

Large subunit of the human mitochondrial ribosome in complex with virginiamycin m and quinupristin
Total Genus 27
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
27
sequence length
156
structure length
127
Chain Sequence
EFKSIYSLDKLYPESQGSDTAWRVDIPLDRLTISYCRSVNSKAEVRFHLATAEWIAEPVRQKIAITHKNKINRLGELILTSESSRYQFRNLADCLQKIRDMITEASQKLHRIRIENMNRERLRQKRI
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Ribosome
molecule keywords 39S ribosomal protein L32, mitochondrial
publication title To Be Published
rcsb
total genus 27
structure length 127
sequence length 156
ec nomenclature ec 3.1.1.29: Aminoacyl-tRNA hydrolase.
pdb deposition date 2018-11-25

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
p PF00472 RF-1 RF-1 domain
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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