6ITMB

Crystal structure of fxr in complex with agonist xj034
Total Genus 3
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
3
sequence length
12
structure length
12
Chain Sequence
DHQLLRYLLDKD
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription
molecule keywords Bile acid receptor
publication title Pose Filter Ensemble for Docking Screens Facilitates the Discovery of a Novel, Orally Active, Nonsteroidal Farnesoid X Receptor Agonist for the Treatment of NAFLD
rcsb
source organism Homo sapiens
total genus 3
structure length 12
sequence length 12
chains with identical sequence D
ec nomenclature
pdb deposition date 2018-11-23
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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