6J5EH

Crystal structure of hiv-1 fusion inhibitor sc29ek complexed with gp41 nhr (n44)
Total Genus 12
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
12
sequence length
29
structure length
29
Chain Sequence
b'WEEWDKKIEEYTKKIEELIKKSEEQQKKN'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords Envelope glycoprotein
publication title Crystal structure of HIV-1 fusion inhibitor SC29EK complexed with gp41 NHR (N44)
rcsb
source organism Human immunodeficiency virus 1
molecule tags Viral protein/inhibitor
total genus 12
structure length 29
sequence length 29
chains with identical sequence J, L
ec nomenclature
pdb deposition date 2019-01-10
Image from the rcsb pdb (www.rcsb.org)
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...