6KBJA

Structure of lectin from pleurotus ostreatus in complex with malonate
Total Genus 67
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
67
sequence length
339
structure length
339
Chain Sequence
TCKITATPSQFQPALLNASKWIWTGENPIPGGSNIISTRPFRKNITAPCGKCSVCATIVVASDDAHTFYVNGVRIGTGAGFRQGQALFVALQPTWNLFAIAGQNLVANSPAGIMASILVHFSDGTSETFVTDESWKTLRAAPPENFQLPSTNDSNWPSAAVQGAYQNSVWGPPVLPPVLPLRGSNWIWTSDNVNGAAPVGSRAFRKTVNQCTKVAVCATVLIAADDRYTLYVNGATVGSGSSYTVADAYTIPNLHPTFNTFAINATNGGGPAGVIATILITYSDGSNETVVTDASWKAIQTIPQGFQPPLIDEFGWESAKIIGAFGVAPWGAGMVIPSA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Sugar binding protein
molecule keywords Lectin
publication title Crystallographic and calorimetric analysis on Pleurotus ostreatus lectin and its sugar complexes - promiscuous binding driven by geometry.
pubmed doi rcsb
total genus 67
structure length 339
sequence length 339
ec nomenclature
pdb deposition date 2019-06-25
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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