6KWZA

Crystal structure of fragmin f3 domain with calcium ion
Total Genus 26
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
26
sequence length
98
structure length
98
Chain Sequence
GPPAVLLRLSDASGKFEFTEVARGLKVKRNLLDSNDVFVLYTGAEVFAWVGKHASVGEKKKALSFAQEYVQKAGLPIHTPVARILEGGENEVFEDFFD
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Cytosolic protein
molecule keywords Actin-binding protein fragmin P
publication title Novel inter-domain Ca2+-binding site in the gelsolin superfamily protein fragmin.
pubmed doi rcsb
source organism Physarum polycephalum
total genus 26
structure length 98
sequence length 98
chains with identical sequence B
ec nomenclature
pdb deposition date 2019-09-09
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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