6LF8C

Crystal structure of psla-1*0401 complex with dodecapeptide rvedvtntaeyw
Total Genus 1
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
1
sequence length
12
structure length
12
Chain Sequence
RVEDVTNTAEYW
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Structural protein
molecule keywords MHC class I antigen
publication title The antigen presenting patterns of MHC class I can be affected by a single-amino acid through different ways
rcsb
source organism Sus scrofa
total genus 1
structure length 12
sequence length 12
ec nomenclature
pdb deposition date 2019-11-30
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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