6LGOA

Crystal structure of cystathionine gamma synthase from xanthomonas oryzae pv. oryzae in complex with homolanthionine
Total Genus 121
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
121
sequence length
387
structure length
387
Chain Sequence
TPCTAATAAVRAGIDRDTAYGAVTPPIVLSSNFSFDGFGNKRQYDYTRSGNPTRDLLGEALAELEGGAGGVITSTGMGAINLVLNAVLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADLTVPRSLADALAQSPKLVLIETPSNPLLRITDLRFVIEAAKKVGALTVVDNTFLSPALQKPLDFGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLTGSPFDAFLTLRGLRTLDARLRVHQENADAIAELLDGHAMVNQVYFPGLATHPGHALAARQQKGFGAMMSFELEGGEAAVRAFVDGLRYFTLAESLGGVESLIAHPASMTHAAMTAEARAAAGISDGLLRLSIGIESAEDLLIDLRAGLSRAEATL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Biosynthetic protein
molecule keywords Cystathionine gamma-synthase
publication title Crystal structure of cystathionine gamma synthase from Xanthomonas oryzae pv. oryzae in complex with homolanthionine
rcsb
source organism Xanthomonas oryzae pv. oryzae kacc 10331
total genus 121
structure length 387
sequence length 387
chains with identical sequence B, C, D
ec nomenclature
pdb deposition date 2019-12-05

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01053 Cys_Met_Meta_PP Cys/Met metabolism PLP-dependent enzyme
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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