6LL8A

Type ii inorganic pyrophosphatase (ppase) from the psychrophilic bacterium shewanella sp. as-11, mg-pnp form
Total Genus 109
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
109
sequence length
306
structure length
306
Chain Sequence
SMYVVGHKIPDSDSICGAIALAYLKNQIGEPAIAARLGELSPETAFILEKFGFEAPEYKTSYAGEEVYIVDHSEITQAPDDIAQATIVGIVDHHKLGDLTTSTPLECWIRPVGCSNTVIKMMYDFYQVKIPANIAGIMMCAILSDTVIFKSPTCTTADIRCVEALAEIAGVEDFKEVGMDMFKVKSAVEGTPARDLVMRDFKDFNMNGNLVGIGQLEVIDLAVFDDIKADLEADIAKLKVEGNRHSVLLLLTDIMKEGSEMLVVSDSADLTERAYGKPTVDGRVWLDGVLSRKKQVVPALQDAFQK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Metal binding protein
molecule keywords Inorganic pyrophosphatase
publication title X-ray Crystallography and Electron Paramagnetic Resonance Spectroscopy Reveal Active Site Rearrangement of Cold-Adapted Inorganic Pyrophosphatase.
pubmed doi rcsb
source organism Shewanella sp. as-11
total genus 109
structure length 306
sequence length 306
chains with identical sequence B
ec nomenclature
pdb deposition date 2019-12-21
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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