6LLBA

Crystal structure of mpy-rnase j (mutant s247a), an archaeal rnase j from methanolobus psychrophilus r15, in complex with 6 nt rna
Total Genus 151
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
151
sequence length
468
structure length
463
Chain Sequence
SSHHHHHHSSGLVPASTEIGIIAVGGYNEMGRNMTAIRVNEDIIIIDMGIRLDRVQIHEDVDTDRMHSLELIEMGAIPDDTIMNEVNGNVRAIVCTHGHLDHIGAIPKLAHRYAAPIIATPYTTALIKHQIDSERKFGVKNNIVALKAGETLEITKDITIEFINTQHSIIDTVFVAIHTPSGAVVYACDFKFDRTPTLGEVPDFDRLKELGKEGVIALITESTNAGRNGKTPSELIAHMMLKDVLLGTEESAVGMIVTTFAAHIARVNSIVQFAQEMGRIPVLLGRSMERYVGTAYQLGYIDLPENVEIYGSRRDIDNALKKIMEAGKDKYLPVMTGHQGEPGAVLGRIANGETPFKVETGDRIIFSANVIPNPMTQANRYALETKLKMKGARIYDNVHVSGHAYREDHWELLRMLKPEHVIPAHGTIQMHSEYIQMAEDAGYSLGDTLHLLRNGEELYIEED
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Rna binding protein/rna
molecule keywords MPY-RNase J
publication title Crystal structure of mpy-RNase J (mutant S247A), an archaeal RNase J from Methanolobus psychrophilus R15, in complex with 6 nt RNA
rcsb
source organism Methanolobus psychrophilus r15
total genus 151
structure length 463
sequence length 468
chains with identical sequence B
ec nomenclature
pdb deposition date 2019-12-22
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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