6LTBA

Crystal structure of nonribosomal peptide synthetases (nrps), fmoa3 (s1046a)-amppnp bound form
Total Genus 283
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
283
sequence length
1075
structure length
928
Chain Sequence
AAELPPLVPEPGDAGQPFPLTPTQQALWVGGCYGYFEWERPELDLARYRRAWERLVAHHPGLRTVVRPDGTQHVLERPGPVPITVEDLRQDPDAVRRLEESRLDPGTWPMFDLRVVLLSGRVRVQLGIDLQLMDASSLFLNLFSDLVTLYDDPDAALASQKLAFRDFARWLEEDVRGGARWRADWAYWQERLDGLPPAPDLPAARKFERCMVRCPAEEFALLRERALAHGLTETELLVGAFAEVLRGWSSDPAFTLNVPVFQRFDVPGIEDVIGDYTNPILLEARPEGRTVAERIVALAARLRADTRHASVNGVEVLRELARRRGLAAAAMPVVVTSLLGLPSAARSITEFGTEVHSITQTPQVSLDFQIRPEDGELRLVWDHRSGAFAPGVVEGAFEAFLDLVGRMLADEPGHGVWEAPFADMRSRRDRAVWNETNDTAEPVPAVLLQERFFAQARRTPDAEAVVASGLRLTYDELARHAYRIGNTLRERGVRPGDLVGVVMEKGWEQYAAVYGILAAGGAYLPIDAASPRGRVARLLESAGAGIVLTQSRLRDELDLPAGTTVLRADTDFETASTAPLTPVQGPDDPAYVIYTSEPKGVVVAHRGVANLVRDVRRRFAVTPADRLLALSGLHFDASVYDVFGPLACGATVVVPPPFRRAEPDVWAELVRDERVTFWNSVPVLLELLVGEAESRDDRPLATLRLAVVSGDWIPLDLPGRARAQAPGLRVVGSGGPTETICWSLFHPIDAVDPQWTSIPYGKPIANQRYYIVDRDLRPRPTWARGEMAVASPLGLALGYLNDPERTAAKFVTLPGTGERAYLTGDFGRLLPDGGIEILGRTDVGLLAELVAACVAELLGLDEVPTTGNFFRLGGDALSGTRLASRLQDLLGAPVPIRTVFGNPVLGDLASAIAGDPAAGPQAIRVARL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Biosynthetic protein
molecule keywords Nonribosomal peptide synthetase
publication title Crystal Structure of Nonribosomal peptide synthetases (NRPS), FmoA3 (S1046A)-AMPPNP bound form
rcsb
source organism Streptomyces sp. sp080513ge-23
total genus 283
structure length 928
sequence length 1075
ec nomenclature
pdb deposition date 2020-01-22

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00501 AMP-binding AMP-binding enzyme
A PF00550 PP-binding Phosphopantetheine attachment site
A PF00668 Condensation Condensation domain
A PF13193 AMP-binding_C AMP-binding enzyme C-terminal domain
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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