6NHQB

Crystal structure of the a/hong kong/1/1968 (h3n2) influenza virus hemagglutinin ha2 i45m mutant
Total Genus 60
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
60
sequence length
172
structure length
172
Chain Sequence
GLFGAIAGFIENGWEGMIDGWYGFRHQNSEGTGQAADLKSTQAAMDQINGKLNRVIEKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQHTIDLTDSEMNKLFEKTGRQLRENAEDMGNGCFKIYHKCDNACIESIRNGTYDHDVYRDEALNNRFQ
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Viral protein
molecule keywords Hemagglutinin HA1 chain
publication title Influenza H3N2 viruses have a low genetic barrier to resistance to broadly neutralizing hemagglutinin stem-binding antibodies
rcsb
source organism Influenza a virus (strain a/hong kong/1/1968 h3n2)
total genus 60
structure length 172
sequence length 172
chains with identical sequence D, F
ec nomenclature
pdb deposition date 2018-12-23
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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