6NUOQC

Modified trna(pro) bound to thermus thermophilus 70s (cognate)
Total Genus 38
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
38
sequence length
205
structure length
205
Chain Sequence
b'GNKIHPIGFRLGITRDWESRWYAGKKQYRHLLLEDQRIRGLLEKELYSAGLARVDIERAADNVAVTVHVAKPGVVIGRGGERIRVLREELAKLTGKNVALNVQEVQNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSGRIGGAEQARTEWAAQGRVPLHTLRANIDYGFALARTTYGVLGVKAYIFLGE'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords 16S rRNA
publication title Structural insights into mRNA reading frame regulation by tRNA modification and slippery codon-anticodon pairing
doi rcsb
molecule tags Ribosome
total genus 38
structure length 205
sequence length 205
chains with identical sequence XC
ec nomenclature
pdb deposition date 2019-02-01

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
QC PF00189 Ribosomal_S3_C Ribosomal protein S3, C-terminal domain
QC PF07650 KH_2 KH domain
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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