6NYIA

Crystal structure of computationally designed protein xxa
Total Genus 39
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
39
sequence length
98
structure length
97
Chain Sequence
GSHMGTEDLKYSLERLREILERLEENPSEKQIVEAIRAIVENNAQIVEAIRAIVENNAQIVEILRAIIEALEAIGGTKILEEMKKLLKDLKRSLERG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags De novo protein
molecule keywords Design construct XXA
publication title Computational design of closely related proteins that adopt two well-defined but structurally divergent folds.
pubmed doi rcsb
source organism Synthetic construct
total genus 39
structure length 97
sequence length 98
chains with identical sequence B, C
ec nomenclature
pdb deposition date 2019-02-11
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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