6PDQB

Ancestral effector caspase 3/6/7
Total Genus 15
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
15
sequence length
93
structure length
87
Chain Sequence
HKIPAEADFLIAYSTAPGYYSYRNTSNGSWFIQSLCEVLNKYGSELEIMEILTRVNHKVSLRESSFNGKKQMPCFASMLTKKLYFSP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Apoptosis
molecule keywords Ancestral Effector Caspase-3/6/7
publication title Resurrection of ancestral effector caspases identifies novel networks for evolution of substrate specificity.
pubmed doi rcsb
source organism Homo sapiens
total genus 15
structure length 87
sequence length 93
chains with identical sequence E
ec nomenclature
pdb deposition date 2019-06-19
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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