6PLKH

Crystal structure of zikv-116 fab in complex with zikv envelope diii
Total Genus 51
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
51
sequence length
225
structure length
225
Chain Sequence
EVQLVQSGRGLVRPGGSLRLSCAASGFTFSNYAMSWVRQGPGMGLEWVSTITADSDSKYYVDSVKGRFTISRDNSKDTLFLHMTSLRAEDTAVYYCAKDRLSRGVGELYDSWGQGTLVTVSSASFKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Antiviral protein
molecule keywords ZIKV-116 heavy chain
publication title The mechanistic basis of differential neutralization of ZIKV and DENV1 strains by a DIII lateral ridge antibody
rcsb
source organism Homo sapiens
total genus 51
structure length 225
sequence length 225
chains with identical sequence I
ec nomenclature
pdb deposition date 2019-07-01
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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