6PSFD

Rhinovirus c15 complexed with domains i and ii of receptor cdhr3
Total Genus 1
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
1
sequence length
30
structure length
25
Chain Sequence
NINYYKDSASSGLSRDPSKFTQPLV
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Virus/cell adhesion
molecule keywords Capsid protein VP1
publication title Cryo-EM Structure of Rhinovirus C15a Bound to its Cadherin-Related Protein 3 Receptor
doi rcsb
source organism Homo sapiens
total genus 1
structure length 25
sequence length 30
ec nomenclature
pdb deposition date 2019-07-12
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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