6Q8OK

Respiratory complex i from thermus thermophilus with bound piericidin a
Total Genus 34
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
34
sequence length
95
structure length
95
Chain Sequence
MSYLLTSALLFALGVYGVLTRRTAILVFLSIELMLNAANLSLVGFARAYGLDGQVAALMVIAVAAAEVAVGLGLIVAIFRHRESTAVDDLSELRG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Key role of quinone in the mechanism of respiratory complex I.
pubmed doi rcsb
molecule keywords NADH-quinone oxidoreductase subunit 1
molecule tags Membrane protein
total genus 34
structure length 95
sequence length 95
chains with identical sequence S
ec nomenclature ec 7.1.1.-:
pdb deposition date 2018-12-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
K PF00420 Oxidored_q2 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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