6SP8A

Structure of hyperstable haloalkane dehalogenase variant dhaa115 prepared by the 'soak-and-freeze' method under 150 bar of krypton pressure
Total Genus 104
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
104
sequence length
291
structure length
291
Chain Sequence
EIGTGFPFDPHYVEVLGSRMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPDLDYRFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIAFMEFIRPIPTWDEWPEFARELFQAFRTPDVGRELIIDQNAFIEGILPKFVVRPLTEVEMDHYREPFLKPVWREPLWRFPNELPIAGEPANIWALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAARLAESLPNLKTVFIGPGLHYLQEDNPDLIGSEIARWLPAL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords Haloalkane dehalogenase
publication title Decoding the intricate network of molecular interactions of a hyperstable engineered biocatalyst
doi rcsb
source organism Rhodococcus rhodochrous
total genus 104
structure length 291
sequence length 291
chains with identical sequence B
ec nomenclature ec 3.8.1.5: Haloalkane dehalogenase.
pdb deposition date 2019-08-31

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00561 Abhydrolase_1 alpha/beta hydrolase fold
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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