6T9AA

Crystal structrue of rsl w31fw76f lectin mutant in complex with l-fucose
Total Genus 13
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
13
sequence length
88
structure length
88
Chain Sequence
SVQTAATSWGTVPSIRVYTANNGKITERCFDGKGWYTGAFNEPGDNVSVTSWLVGSAIHIRVYASTGTTTTEWCFDGNGWTKGAYTAT
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Sugar binding protein
molecule keywords Fucose-binding lectin protein
publication title The CH-pi interaction in protein - carbohydrate binding: Bioinformatics and in vitro quantification.
pubmed doi rcsb
source organism Ralstonia solanacearum
total genus 13
structure length 88
sequence length 88
chains with identical sequence B, C
ec nomenclature
pdb deposition date 2019-10-26
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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