6TU5CCC

Influenza a/h7n9 polymerase core (apo)
Total Genus 20
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
20
sequence length
125
structure length
118
Chain Sequence
MERIKELRDLMSQSRTREILTKTTVDHMAIIKEKNPALRMKWMMAMKYPITADKRIMEMIPERNEQGQTLWSKTNDAGSDRVMVSPLAVTWWNRNGPTTSTVHYPKVYKTYFEKVERL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title A structure-based model for the complete transcription cycle of influenza polymerase
rcsb
source organism Influenza a virus (a/zhejiang/dtid-zju01/2013(h7n9))
molecule tags Viral protein
molecule keywords Polymerase acidic protein
total genus 20
structure length 118
sequence length 125
chains with identical sequence FFF
ec nomenclature
pdb deposition date 2020-01-02
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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