6TVDA

Crystal structure of the haemagglutinin from a h10n7 seal influenza virus isolated in germany in complex with avian receptor analogue, 3'-sln
Total Genus 70
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
70
sequence length
320
structure length
320
Chain Sequence
DPDKICLGHHAVANGTIVKTLTNEQEEVTNATETVESTSLNRLCMKGRNHKDLGNCHPIGMLIGTPACDLHLTGTWDTLIERKNAIAYCYPGATVNEEALRQKIMESGGISKINTGFTYGSSINSAGTTKACMRNGGNSFYAELKWLVSKNKGQNFPQTTNTYRNADTAEHLIMWGIHHPSSTQEKNDLYGTQSLSISVGSSTYKNNFVPVVGARPQVNGQSGRIDFHWTLVQPGDKITFSHNGGLIAPSRVSKLIGRGLGIQSEAPIDNSCESKCFWRGGSINTRLPFQNLSPRTVGQCPKYVNKKSLMLATGMRNVPE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Viral protein
molecule keywords Hemagglutinin HA1
publication title Hemagglutinin Traits Determine Transmission of Avian A/H10N7 Influenza Virus between Mammals.
pubmed doi rcsb
source organism Influenza a virus
total genus 70
structure length 320
sequence length 320
chains with identical sequence C, E, G, I, K
ec nomenclature
pdb deposition date 2020-01-09
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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