6U45A

Crystal structure of methanoperedens nitroreducens elongation factor 2 bound to gmppcp and magnesium
Total Genus 224
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
224
sequence length
726
structure length
726
Chain Sequence
b'RRKKMVERVTTLMDKPEFIRNIGIVAHIDHGKTTLSDNLLAGAGMISKELAGEQLFMDFDEEEQKRGITIDSANVSMVHEYEGKEYLINLIDTPGHVDFGGDVTRAMRAVDGAVVVVDAVEGAMPQTETVLRQALRENVVPILFINKVDRLIMELKLTPQDMQIRLGAVIDKINKLIKGMKPDSYDGLRLDAAVGKVAFGSALNNWAISVPFMKKTGIGFKEVIEYCMEDQQQKLAERCPLHAVVNDMVIRFLPNPVQAQKERIKVIWHGDKGSEIGKSMANVDPNGKVALMITDISTDPHAGEVATGRLFSGTLERGKEVYISGMPNPNRIQQVGLFMGPERIEVDRITAGNIVAVTGLADAIVGSTASTDKAMVPFESIRHVSEPVVTVAVEAKHMKDLPKLVEVLRQVAKEDPTLKVTINQETGEHLLAGMGELHLEIVAHRIQRDKHVEITTSKPLVVYRETVSAHAGPVEGKSPNRHNRFYIEIEPLQPAIFELVRNGEISMKQQEVERRDILMKAGMSKEEAKGITHISENNIFIDMTKGIQYLNETMELVLEGFEEVIKGGPLSREPVMGLKVKLMDAKLHEDSIHRGPAQVIPASRQAIQAAMLMAGATLLEPFQKVFIHVPQEQMGGAMREIQGRRGAILDMKTEGDTTIIEAKAPVAQLFGFAGDIRSATEGRAMWSTEFLGFEPIPANMLAETVMGIRQRKGLKLEMPKPSDFIS'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords Elongation factor 2
publication title Structural basis of elongation factor 2 switching
doi rcsb
source organism Candidatus methanoperedens nitroreducens
molecule tags Translation
total genus 224
structure length 726
sequence length 726
chains with identical sequence B
ec nomenclature
pdb deposition date 2019-08-22
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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