6U9XA

Structure of t. brucei mers1-rna complex
Total Genus 76
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
76
sequence length
322
structure length
294
Chain Sequence
VHLQQSTIQLEKLSHPPARFDSFVYKWQTKAALARKVSGPMREWAAELKYRTGVHIELEPTYPERLSENAQWGAYETADDVDITVYLFGSERGIFNCHKLMEAAIQQDPVYVRLGIFRRLANSSEVEWLMLRRINRELRPPDIPPISLKLPGKWTLLYERYKEAAIRTLWEETGITVDASNVYPTGHLYQTVPQYYWRVPVRYFVAEVPSDIRVEGPQVVPLQYMRNWDARLLRQSPDPIDRAWAQLADPATGCAWMKASMIDQLQKPLRGDNYMAIRYTPPPYSNLQEVVGLG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Rna binding protein/rna
molecule keywords Mitochondrial edited mRNA stability factor 1
publication title Structures of MERS1, the 5' processing enzyme of mitochondrial mRNAs in Trypanosoma brucei
rcsb
source organism Trypanosoma brucei
total genus 76
structure length 294
sequence length 322
chains with identical sequence D
ec nomenclature
pdb deposition date 2019-09-09
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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