6UURA

Human prion protein fibril, m129 variant
Total Genus 0
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
0
sequence length
40
structure length
40
Chain Sequence
KTNMKHMAGAAAAGAVVGGLGGYMLGSAMSRPIIHFGSDY

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Protein fibril
molecule keywords Major prion protein
publication title Cryo-EM structure of a human prion fibril with a hydrophobic, protease-resistant core
doi rcsb
source organism Homo sapiens
structure length 40
sequence length 40
chains with identical sequence B, C, D, E, F, G, H, I, J
ec nomenclature
pdb deposition date 2019-10-31
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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