6V5Vg

Structure of gamma-tubulin in the native human gamma-tubulin ring complex
Total Genus 102
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
102
sequence length
443
structure length
369
Chain Sequence
REIITLQLGQCGNQIGFEFWKQLCAEHGISPEAIVEEFTDRKDVFFYQYIPRAVLLRVIHSILNSPYAKLYGNNWASGFSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGTGSGLGSYLLERLNDRYPKKLVQTYSVFPVQPYNSLLTLKRLTQNADCLVVLDNTALNRIATDRLHIQSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTVLDVMRRLLQPKNVMVSNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLRVSGLMMANHTSISSLFERTCRQYDKLRKREDNFDEMDTSREIVQQLIDEYHAATRPDYIS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Structural protein
molecule keywords Tubulin gamma-1 chain
publication title Asymmetric Molecular Architecture of the Human gamma-Tubulin Ring Complex.
pubmed doi rcsb
total genus 102
structure length 369
sequence length 443
ec nomenclature
pdb deposition date 2019-12-04
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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