6VIKB

Crystal structure of mouse xm rabl3 in complex with gtpgammss
Total Genus 52
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
52
sequence length
203
structure length
173
Chain Sequence
FASLDRVKVLVLGDSGVGKSSLVHLLCHNQVLGNPSWTVGCSVHDYKEGTPEEKTYYIELWDVGGSVKSTRAVFYNSVNGIILVHDLTNKKSSQNLYRWSLEVNQIPLLVIGTKLDQIHETKRHEVLIRTAFLAEDFNAEEINLDCTNPRSSAAGSSNAVKLSRFFDKVIEKR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Immune system
molecule keywords Rab-like protein 3
publication title Genetic and structural studies of RABL3 reveal an essential role in lymphoid development and function.
pubmed doi rcsb
source organism Mus musculus
total genus 52
structure length 173
sequence length 203
ec nomenclature
pdb deposition date 2020-01-13
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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