6VW4A

2.35 angstrom structure of caci_6494 from catenulispora acidiphila in complex with s-dnpa
Total Genus 39
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
39
sequence length
142
structure length
135
Chain Sequence
QAALYAEVQQHQARQMHALDEGKFEEYADTFTPDGVFRHTPGRDPAIGREAIVRELNEFHERYAPVQRRHMFTMLAIDEDSAVQADFYTLVLTTRVDGLTVGPSCPVRDVLVRGADGRLLTASRWVEHDNRTVAE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Unknown function
molecule keywords Aromatic-ring-hydroxylating dioxygenase beta subunit
publication title 2.45 Angstrom structure of Caci_6494 from Catenulispora Acidiphila
rcsb
source organism Catenulispora acidiphila (strain dsm 44928 / nrrl b-24433 / nbrc 102108 / jcm 14
total genus 39
structure length 135
sequence length 142
chains with identical sequence B
ec nomenclature
pdb deposition date 2020-02-18

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF13577 SnoaL_4 SnoaL-like domain
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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