6W8UA

Cryo-em of the pyrobaculum arsenaticum pilus
Total Genus 25
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
25
sequence length
140
structure length
140
Chain Sequence
MTSLEIAIIVAIVLVIAIAVGWYLYTTFAAAGQQTGLTATKATIYVTKDGNVYLNVTLVPQGAAQVAISSIEVAGVSIPCTSSNLVKAPGEYVIELSSVSVSVGQVLTGRIVLASGAISPFTATVVAADHVPSTENKLCS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Protein fibril
molecule keywords pilin
publication title Cryo-EM of the Pyrobaculum arsenaticum pilus
doi rcsb
total genus 25
structure length 140
sequence length 140
chains with identical sequence B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, a, b, c, d, e, f, g, h, i, j, k, l, m, n, o
ec nomenclature
pdb deposition date 2020-03-21
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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