6WARB

Crystal structure of the mers-cov rbd bound by the neutralizing single-domain antibody mers vhh-55
Total Genus 20
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
20
sequence length
121
structure length
121
Chain Sequence
VQLQESGGGSVQAGGSLRLSCVASGSIFSINAMDWYRQAPGKQRELVAGITSGGSTNYGDFVKGRFTISRDNAKNTVYLQMDSLKPEDTAVYYCAAEVGGWGPPRPDYWGHGTQVTVSSGS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Viral protein/immune system
molecule keywords Spike protein
publication title Structural Basis for Potent Neutralization of Betacoronaviruses by Single-domain Camelid Antibodies
rcsb
source organism Middle east respiratory syndrome-related coronavirus
total genus 20
structure length 121
sequence length 121
chains with identical sequence D, F, H, J, L, N, P
ec nomenclature
pdb deposition date 2020-03-25
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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